Fragilariopsis cylindrus: FRACYDRAFT_167654
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Entry
FRACYDRAFT_167654 CDS
T04784
Name
(GenBank) eIF-3c_N-domain-containing protein
KO
K03252
translation initiation factor 3 subunit C
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
fcy03012
]
FRACYDRAFT_167654
Translation factors [BR:
fcy03012
]
Eukaryotic type
Initiation factors
eIF-3
FRACYDRAFT_167654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
FCH
Motif
Other DBs
NCBI-ProteinID:
OEU19432
JGI:
167654
UniProt:
A0A1E7FMM5
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MSRFWAGDSSSDDDESDDSSFYSSDDDDNRAGAGAGNKWVDFSDSDSDDDEARVVKSGKD
RALETFQKQIVAIRSAMRKRDYYIIQTEFDELAKAMVKNKKVLQAGVPRPLVKILVDLED
TYIPERLTDKAAFKKLSARQGRSLNRMKLTLKKHNKAYAVVMDHYRKNPDDDNDDDDDVD
LAGDGGGNDSDSSSGSSSSSSSSSSSSSSSDDDKESMVSSKDHEAIRAPKSVIPVEGLTA
ALLNRKVQEIASSRGRRGTDARQLLRQFEGLSRLSMRFGPRVEVPILMYVISAQFSLQRT
MDDYMDTATWRSCSTYLERISNVIVDDAMTDDEKKTIPVVGSLSMHMSRLEEEYTKSLQK
ISHHTQEYVTRLRDESKLVSLLGKTQSYFEREGMINEAAQMAQLHIEHIYYRHDSIGRQV
DKAAEFYDKFGEVAILHPVCVTKHAATGTAIDTATTHPAASLGKPVLDDAASVAENTDYS
ALVGRLCTYIYKHGTDVAKKRSTICHVYHHALHDRFIEGRDLLLMSHIQEVIYDVEDITT
MIMFNRMMVQLGMCAFREGRIWEAHQCLTEICSSRVRELLAQGMSMGRYSDKTPEQEKAE
KRRQVPYYQHINLDLLEGCHLISAMLLEIPNIAAASVSGGVDSRRLRPISRSFRKYQDIY
SHQVFTGPPEQTRDHVMRASTALSKGDWKTCVDLCTCLEVWDLVPGEGSAEGIKTMLASK
IKLEGLRTYLFAFSPQYESLSLSQLCAMFEMSKNEVHSVVSKMIINRELLASWDQPTETI
VLRKADPSPVQLMALQYSEKAVHLVEANERLLDAFTGRRDEWRGGRGGGRGGRGDGGGGR
GRGRGGGRGSYNNQGGYNNNNGRGGGGGRGGRGGRGRGGGRGGRGGRGRGDYNNRSNNQG
YGQQRYNN
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgattctgggcaggagattcttcgtccgacgatgacgagtctgacgattcctca
ttttactcgtccgacgacgacgataaccgtgccggagccggtgctgggaacaaatgggta
gacttttccgacagtgattctgatgacgatgaagctagggttgttaagtctggcaaggac
cgtgcacttgaaaccttccaaaaacagatcgttgcaatccgaagtgcaatgagaaaacgt
gattattatatcatccaaaccgagttcgatgagctcgcaaaagctatggtgaaaaataag
aaggttttacaggctggtgtgcctcgtcccttagtcaaaatcctcgtggatttggaagat
acatacatcccagaacgtttaaccgacaaggcagcctttaaaaagctgtcggcccgtcag
ggtagatccttgaatcggatgaaactcacgttgaaaaaacacaacaaagcctacgcggtt
gtgatggatcattaccgtaaaaaccctgacgacgacaacgatgatgatgatgatgtggat
ttagccggtgacggaggcggcaatgactcggatagcagcagcggaagttcgagctcaagt
agtagttccagctcctcttcgagttcttccgacgatgataaggagtcaatggtttcttcc
aaagatcacgaggcaatccgtgctccgaaatcggtgataccggtagaaggtttaacggca
gctttgttaaacaggaaggttcaggagattgcatcttcacgtggacgtcgcggaaccgat
gctcgacaacttcttcgtcagtttgagggattatcccgcctatcgatgcgattcggtccc
cgtgtggaagttcctattttgatgtatgttattagtgctcaattttctttgcaacgaacg
atggatgattacatggataccgccacgtggagatcatgctcgacgtacctagaacgtatc
tctaacgtcattgtcgatgatgcgatgaccgacgatgagaaaaagactatccccgtagtt
ggatctctatccatgcatatgtcgcgcctcgaagaggagtacaccaagagtctacaaaaa
atttcgcaccacacgcaagagtatgtaacgcgactacgggatgaatcaaaactagtatct
cttcttggcaagacacaatcttactttgaacgcgaaggtatgatcaatgaagccgcccaa
atggcacaacttcacatcgagcacatctattatcgtcatgattcaattggacgacaggtg
gacaaagctgctgagttttatgataagttcggcgaggtggctattctccatcctgtttgt
gttactaagcatgctgcgactggtactgctatcgacactgccacaacgcatccagctgct
agcttgggcaaacctgtcttggatgatgcagcctcggttgctgagaatacggattacagt
gcactggtgggaagactgtgcacttacatatacaaacacggaaccgacgtagccaaaaaa
cggtccactatttgccatgtttatcaccatgctcttcatgatcgattcatcgaaggacgt
gacttgttgcttatgtcccacattcaggaagttatctacgatgtggaagatatcacaact
atgatcatgtttaatagaatgatggtccaattgggtatgtgcgcattccgtgagggtcgt
atttgggaggcccatcagtgtctgactgaaatctgcagcagtagagttcgtgaattgttg
gcacaaggaatgagtatgggtcgttacagcgacaagacacctgaacaagaaaaggccgaa
aagcgtcgccaggtaccgtattatcagcatatcaatttggatctgctagaaggttgtcat
ttgatcagtgctatgttattggaaattcccaacatcgctgcagcgtcggtgagcggtggt
gttgattcccgtcgacttcgtcccatttctcgttcgttccgtaagtaccaagacatttac
agccatcaagtgtttacaggcccgcctgaacaaactcgtgatcatgtaatgcgtgcttcc
actgctctatcgaagggtgactggaagacatgtgtcgatttgtgtacttgtttggaagtt
tgggacctagttcccggagagggatcagccgaaggtatcaaaaccatgcttgcatcgaaa
atcaaattggagggactacgtacctacctgtttgccttttcacctcaatacgaatcactc
tctctaagtcagctttgtgcgatgtttgagatgagcaagaacgaagttcatagcgtcgtt
tccaagatgatcattaacagagaattgttagcgtcttgggaccaaccgactgaaaccatt
gtcttgcgcaaagcggatcctagtccagtccaattgatggcacttcaatattccgaaaag
gctgttcatttggtagaagccaacgaacggttgttggatgcctttaccggtcgtagagac
gaatggagaggcggacgaggaggcggccgtggtggtcgcggtgatggtggtggaggccgt
ggtcgaggccgtggtggaggacgaggcagttataacaatcaaggtggatacaataacaat
aatggtcgtggtggaggtggcggtcgcggaggaagaggtggacgtggtcgaggtggtgga
cgcggcggtcgtggaggaagaggtcggggtgattacaataaccgatccaataaccaaggg
tatggacagcagagatacaataattag
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