Fragilariopsis cylindrus: FRACYDRAFT_229371
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Entry
FRACYDRAFT_229371 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
Viral_helicase1
AAA_30
AAA_19
AAA_22
WW
AAA_16
AAA
SLFN-g3_helicase
UvrD_C_2
nSTAND3
NTPase_1
CDC45
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
OEU07894
JGI:
229371
UniProt:
A0A1E7EPV8
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MGIHKSYKRPSPAAVMAAARAKAKALKEVKPEDNDDDDDDDDDDPKGEVNGDANDKSNDD
NLKTTRKRKLNNQDNDNADTAKKVSKKRLANLVQNAATVTAGQIDEWSSSSVTSDITPED
FWKKIRIWDFVAQLAKLQLESNNYNNKNNNKNGDDAKEKKEQHKVVPDTFINARHYVSVW
APLCIAECKAQLLSDVVTECGQTRGNRNTSPFVLVKVETTWKTGRNNTNVDYFSDILDSC
QVILKIPENQGRSNQHNRLQFYPHDICCLVPVDKKDIVENLLFQSNRGGGGRQRDGDLED
ADSEIFKHACIVGHAETHRGGVHGLILKVSKRKWAQVGSVKSGGGEMFVLKIGSNITALR
EFTALASVDSIPLKHYLLGSHINDRKRMQSSNTKASLKDGDNNPDLQHSNKKALIKSMGG
VDALGKGFTEYAQKKFNASQLHAISASSQGYGDGGFTLIKGPPGTGKTTTLVNILNALHI
RQFNKYYDQVRNIMAIQTGNRQTALDIARRAKPRLLVCAPSNAAVDNVILKIMEDGFVDG
SGKRYNPSIVRVGVGKSASVKDVALETKVDQILSENSDAQQLDNSIQGFKMEIQRISSDI
VKCRKRIHAISNASPWPLAQVWEIRVDEDSFDETGRVFFVNHQDQSTTFECPPPPEPGQA
QFPARSMPEYKHYMSRIVKLVENFFTIKSNLEQSTIIKGSVGNGQRHFEVKQNLEMHVLN
SVHIVMTTLGTAGSRALSDGVDKFEVVVIDEAAQSVEPATLAAMQLGSRHCVMVGDPQQL
PATIFNVSGKNSKYDRTGEKIYMLNEQYRMHPKISHFPRHIFYKGALKDGPNVSKSDYGN
PLVKVITSRVPAFQPFTILDLDSQEERGGTSLSNSTEAHLAVHLYTSLKQITGGLSASSR
VAVITPYSQQAGLLRRCFGDLLGKDYTKYVEVNTVDAFQGREANIVIFSAVRAAGSHGIG
FLSDVRRMNVALTRAKHFLFVIARCKSIVVNPYWKDLVEHARDTNAVVTVPKPKNQHKSN
TRNKGKPSFGPVHEWRLVGSPSIQQPPPPQPLPSDGQPPPPPPPPPAPLGFTSSGIASAP
PPPPPPPPPPILTDPRVAAAQAQGNERNDPRLNHKSNDPRKRKRPRL
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcataaatcatacaaacgaccatcgccagctgccgttatggcagcagcacgg
gccaaggcgaaggccctgaaagaagtgaagccagaggataatgacgacgacgacgacgac
gacgacgacgacccaaaaggtgaagtcaacggtgatgccaatgataaatcgaatgatgat
aatcttaaaacaacgcgaaaacgaaaattaaacaaccaggacaatgataacgccgatacc
gctaaaaaagtctccaagaaaagactggcgaatctagttcagaacgctgctacagtcacc
gcaggccagatagatgagtggtcgtcatcgtcggttacatctgacataactcctgaggat
ttctggaaaaaaataaggatctgggactttgtggcacaattagcgaaattacaacttgaa
agcaacaactataacaataagaataacaataaaaatggtgacgatgcaaaggagaaaaaa
gaacagcataaagtcgttcctgatacttttatcaatgcccggcattatgtttctgtttgg
gcaccactgtgtatcgccgaatgtaaagcccagcttctttccgatgttgtgacagaatgt
ggtcagacgagaggaaaccgcaacacgtcgccatttgtattggtaaaggtagaaactact
tggaaaactggtaggaacaacacgaacgtggattatttctccgatattcttgattcttgc
caagttattctaaagatcccagagaatcaggggagaagtaaccaacataatagactccaa
ttctatcctcacgatatttgttgtttagtaccagtcgacaaaaaggatatagttgaaaat
cttctcttccaaagtaatcgaggaggtggcggacggcaacgcgatggtgatctagaagac
gctgattcagagatttttaaacatgcatgtattgtaggccatgctgagactcatagaggg
ggagtccatggtcttattctcaaggtgtccaaacggaaatgggcacaagtgggtagtgtt
aagtctggtggtggggaaatgtttgttcttaaaatcggttccaatataacagctttacgt
gaatttacggcattggccagtgtcgattcgatcccactgaaacactatttgctaggttcg
catattaatgatcgcaagagaatgcaatcaagcaatactaaggcttctttaaaggatggt
gataacaatcccgatcttcaacatagcaataaaaaggccttaataaaaagtatgggaggt
gtagacgccctaggaaagggattcactgaatatgcacagaaaaaattcaacgcttctcag
ctccatgcaatttccgcttcctcacagggatatggtgatggtggctttaccttgatcaaa
ggaccaccgggaactggaaaaactacaacgttagttaatatattaaacgcgttacatata
cgacaattcaataaatactatgatcaagtacggaacattatggctattcaaactggaaac
cgccagacggctttagatatagcacgaagggcaaaacctagactattggtatgtgctcca
tccaatgcagccgtagataatgtgattttgaagattatggaagatggatttgtcgacggg
agtggaaaacggtataatccatcaattgttcgagtaggtgtcggtaagtccgcttctgtg
aaagacgtcgctttagaaactaaagttgatcagatcttatctgagaactccgatgcacag
caattggacaattcgattcaaggcttcaaaatggaaatacaacggatttcttctgatata
gttaaatgccgaaagagaattcatgcaattagtaatgcatcaccttggcctttggcccag
gtttgggaaatccgggtcgatgaagattccttcgatgaaacaggacgagtgttttttgtg
aatcaccaagaccaatctacaacgttcgagtgtcctcctcctccagagccaggacaggct
cagttcccagcacggtccatgccggagtataaacattatatgtcaagaatagtaaaactc
gttgagaatttcttcaccatcaagagtaatttagaacaatcgacgattataaaaggatca
gtggggaacggacaaaggcactttgaagtcaaacagaatcttgagatgcacgttctgaat
tctgtacatattgttatgactacgcttggaaccgctggaagtcgagcactgagtgatggc
gttgataaatttgaggtggttgtgatcgacgaagcggcacaaagtgtcgaaccagctaca
ctagcggctatgcagttaggctcccgtcattgcgtaatggttggagatccgcaacaacta
cctgctaccatatttaatgtgtccgggaaaaattctaaatacgataggaccggagaaaaa
atatacatgctaaacgaacaatatcgaatgcacccaaaaatttcacactttccacggcac
atattttacaagggagcactcaaagacggtccaaatgtcagcaaatcagactacggaaat
cccttagtaaaagtaataacctccagagtaccagcatttcagccttttacaattcttgac
ttggactctcaagaagagcgtggaggaaccagcttatcaaattcaaccgaagctcattta
gccgttcatttgtatacttccttaaagcaaatcacaggtggcttgtcggcttcttctcgt
gtagcggttattacaccctattctcaacaagcaggcttgttgcgtaggtgttttggcgat
ttgctaggaaaggattacacaaaatatgtcgaagtaaacacagttgatgcttttcagggc
agagaggctaacattgtaattttttctgctgttcgagcagctggtagtcatggaattgga
tttcttagcgacgttagacgtatgaacgtagctttgacaagagcgaaacacttccttttt
gtgattgcaagatgtaaatcaattgtcgtcaacccttactggaaagatcttgtggaacat
gcccgcgatacaaatgctgttgttacagttcccaaacctaaaaatcaacacaagtctaat
acaaggaataaaggaaagccaagctttggaccagttcacgaatggaggcttgttggaagt
ccgtcgattcaacaacctcctccacctcaaccacttccttcagatggccaaccaccgccg
ccacctccacctccaccagctcctttgggttttacttcttccggtattgcatctgctccg
ccaccaccgcctccaccaccaccaccaccaatattgactgatccaagagtagctgctgct
caggctcagggcaacgagagaaacgaccctagattaaaccacaaatccaacgatccgaga
aaacgaaagcgtccacgtctatga
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