Fragilariopsis cylindrus: FRACYDRAFT_239987
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Entry
FRACYDRAFT_239987 CDS
T04784
Name
(GenBank) hypothetical protein
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T2SSS_2
T2SS_PulS_OutS
EF-hand_like
Herpes_capsid
Motif
Other DBs
NCBI-ProteinID:
OEU15306
JGI:
239987
UniProt:
A0A1E7FAY5
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MVDVNNINDEINDDINDDINDDINDDINDDINDDINDDDANNNNRRNCIDVNRCIDVNHC
YFAFSKVVLRYSFALNRFLTWKIKHVREKLMISIAEKDATICYFDGMHPRVLADLQDSRR
RNEEKDESLEAETNLKAIAEGKVVRLQTRVTTLEEEATLQGESLKAETNLKATAESNVVR
LEEEATLQGESLKAETNLKATAESNVIRLQTRVTTLEEGVTLQDESLKAETNLKATAESN
VVRLQTSLGEEEKLKKEASKMVDFLHEKRCEEKETSEQNAKGLQFKYEQTEKEKKTLKDD
LTSTTNDLMNANGKLKTSDGKLKTSEKAKVALNKKLQETIKALALAKDGTHLEYVTRIDK
NRNYKASKLQELTDLAELLYKKFLEKDLPKNKDNEDFPFPLKEVANGGVLLELEQEIDTI
VEIKSDQILFRTFNDLIWKIFFNDKSTKTYDVFLSFNGWIGTNVFDPRNALNCTIRKKRK
REEEESTAASKVRRQSALSSTSSPTNSVPAGGSSSSASGSLASPTGSTTTTTSTTSTSTS
TSSKAGGLAWRDLSDGAKTHAKNLKYSRYSWDNFGTVSSFSRKLSDLNPEEKAAVDFLFE
GEWPPAYAGGAGFESNFVCAKLDAKAGTFFIDRTGVRFFLIRSNGNNKWDAIRLIENKEE
KTCRCPFCKSWKNNKGIHMHVSRCPENKTEAKKKVAGKKGTSNKN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgtcaacaacatcaacgatgaaatcaacgatgacatcaacgatgacatcaac
gatgacatcaacgatgacatcaacgatgacatcaacgatgacatcaacgatgacgacgcg
aacaacaataacagaagaaactgtattgatgtcaatcgctgtattgatgtcaatcactgc
tactttgcttttagcaaagttgtccttagatattcgtttgcattaaatcgatttcttaca
tggaagattaagcatgtaagagagaagcttatgatatcaatcgcagagaaggatgcaaca
atctgttattttgatgggatgcatcccagagttttggctgatctacaagattcaagaaga
cgtaatgaagagaaggatgagtctctcgaagcagagacgaacttaaaagcgatagccgag
ggtaaagtggttcgtttacagactcgtgtaacgactttagaagaagaagcgactttacag
ggtgagtctctcaaagcagagacgaacttaaaagcgacagccgagagtaatgtggttcgt
ttagaagaagaagcgactttacagggtgagtctctcaaagcagagacgaacttaaaagcg
acagccgagagtaatgtgattcgtttacagactcgtgtaacgactttagaagaaggagtg
actttacaggatgagtctctcaaagcagagacgaacttaaaagcgacagccgagagtaat
gtggttcgtttacagacgtctctgggagaggaggagaagttaaaaaaagaagcttcgaaa
atggtcgattttttacacgaaaagcgatgtgaagaaaaagaaacttcagaacagaatgct
aagggtcttcaattcaaatacgagcaaacagagaaggagaaaaaaactcttaaagatgat
cttacatcgaccactaacgacctcatgaacgcaaatggtaaactcaagacatccgatggt
aaactcaagacatccgaaaaggcgaaggttgcccttaacaagaaattacaagaaacaatc
aaggcgctagctttagcgaaagacggtactcatcttgaatatgtgactaggattgacaag
aatcgtaattacaaagcgtcaaagcttcaagagctgaccgatttggctgagttgttatac
aaaaagtttttagaaaaagatcttcccaaaaacaaggataatgaagactttccattccca
ctcaaggaagttgccaacggaggcgttcttttagagttggaacaagaaattgatactatt
gttgaaatcaaatctgatcaaattctctttcgtaccttcaatgatcttatctggaaaata
ttcttcaacgacaagagtactaagacatatgatgttttcttatccttcaacggatggata
ggcacgaacgtgtttgatccgaggaacgcattaaactgtacgatcaggaagaagcgtaaa
agagaagaggaggagtctacagctgcttcgaaggtgaggcggcaatcagctctttcgtca
acttctagtcctactaattctgtgccagctggtggttctagttcttctgcgagtggaagc
ttagcatcacctacaggaagtactactactactacttctactacatctacatctacatct
acgtccagcaaggctggtggtttggcatggagagatttgtcagatggagcaaaaactcac
gcaaagaatctaaaatactctcgatatagttgggataattttgggactgtaagttctttt
tcaaggaaactaagtgatttgaatcctgaagagaaagcagcggtagatttcttatttgaa
ggggaatggcctccggcatacgcaggaggcgcaggttttgagagcaactttgtttgtgct
aagcttgatgccaaggctggtacattttttattgacagaaccggtgtccgtttttttttg
attcgatctaatggtaataataaatgggatgccatccgtctgattgagaataaagaagaa
aaaacatgtagatgccccttctgtaaatcatggaaaaataataagggaattcatatgcat
gtgagtcgttgtcccgaaaacaagaccgaggccaagaagaaagttgcaggtaaaaaaggt
acatcaaacaaaaactag
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