Fragilariopsis cylindrus: FRACYDRAFT_242264
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Entry
FRACYDRAFT_242264 CDS
T04784
Name
(GenBank) hypothetical protein
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_99
CBM_6
CBM_35
B_lectin
Endotoxin_C
LAMININ_IV_B
Motif
Other DBs
NCBI-ProteinID:
OEU13910
JGI:
242264
UniProt:
A0A1E7F6Y4
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MVLLCCFSIKVKALSLIIGILFLVRSADGRPVNSEVTYDANDGILDGDGIKMANNNEGYT
GGEGFVDFGDVGTSVSWSVDIPTTGFYDVAIRYASIADRGPLDLIVNNIKLGSFEIEKVA
DDWDEWDIETIKVYITATGEVQNLKILASQIQGPNVDKIIIKPDLTICKDFNGKKNQCKE
NADTIFCQWKNRKNKCKVSPLCTAINGTNNRKKKKCNKNPRNCKFDVVAGCKNNDDVDVS
LCPTLCPTQAPVAAPVVAPVVAPVVAPVVAPVVAPIPEQDPVLPIIVNSTVVFKSGQKYY
RNQFVSSPDDGKYQVGLDSDGKLVMKEGNNNIWELEDKYGTVISDVHTVAMQSDGNLVLR
PAEQGKKAIWNSETSKNYGAEFHIDDGGQLSIMFENTALWIDGLPRGIYSPVVTVSPDLE
FPVRGYFYYAWYPETWTTGNEKVKYTPNLGSIGEKYYRTGDPVVVENHVKALDWGLADLS
IVSWWGRSDRLDRARITQLLDETVTQRSSIKWTVYYEDEKKFDYSKDQLVDDLNYLKKWF
AWHEAWAHKDGKPVIFIWNEKECEVAERWVAAAKEAGWYVVLKLFGRWKECTNQPDSWHQ
YGVSESYLEYTDTSFTIGPGFFKANADEAEHPRVSRELWCEWVVKMKESKLPWQLIVSFN
EWGEGTAVESAVEWKSDSGYGIYLDCLHDPVRYGSQKEL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggtacttctttgctgcttttctatcaaggtcaaggcactttcccttatcatcggcatc
ttattcttagtaagaagcgcagatggacgaccagtcaatagcgaggtcacatatgacgca
aacgatggtattcttgatggggatggaatcaagatggctaacaataacgaaggatacacg
ggaggtgaaggtttcgtcgatttcggcgacgttgggacatccgtgtcgtggtcggtcgat
attccaactactggattctacgacgtagccatacggtacgcttccatcgcggatcgtggt
cccttggatctgatcgtaaacaacatcaagttaggtagctttgaaattgaaaaagttgca
gatgattgggatgaatgggatattgaaacgatcaaagtatatattactgctactggagaa
gtccaaaatctgaagattcttgcatcccaaatacaaggaccaaacgttgacaagatcatc
attaagccagatttgactatttgcaaggacttcaatgggaaaaaaaaccagtgcaaggaa
aatgctgatacgatcttttgtcagtggaaaaatagaaagaacaaatgtaaagtatctcca
ttatgtactgccattaatggtaccaacaatcggaaaaagaagaaatgtaataaaaatccc
cgcaattgcaaatttgatgtagtcgctgggtgcaaaaataatgatgacgttgatgtttcg
ttatgtccaactctatgtccaactcaagcccctgtcgctgccccagttgttgctcccgtc
gtcgcacctgtcgttgccccagttgtagctcccgtcgttgctccgataccagagcaagat
ccggttttaccaattattgtaaattcgacagtagtttttaaatccggtcaaaaatattat
agaaatcaattcgtatcttcccccgacgatggaaaatatcaggtcgggttggattcggat
gggaaacttgttatgaaggagggaaataataatatctgggagctagaggacaaatatgga
acagtcatatcggatgtacacacagtcgccatgcagtcggatggaaatttggtacttaga
cctgccgagcagggcaaaaaagctatatggaattcagaaacgagtaaaaattatggagcg
gaatttcatattgacgatggtggtcaattatctataatgtttgaaaatacagcactttgg
attgatggtcttcctcgagggatttatagtcccgttgtcaccgtatctcctgacttggaa
tttccagtgagaggatacttctattatgcttggtatccagaaacgtggactactggaaac
gaaaaagtcaaatacacaccaaaccttggcagcatcggggaaaagtattataggactggt
gatccagtcgttgtagagaatcatgtgaaagcactcgactggggtttggccgatctttct
attgtgtcgtggtggggacgaagtgatcgcctagatcgtgctcgtatcactcaattgctc
gacgagacagttactcaacgatcaagtatcaaatggaccgtctattacgaagacgaaaaa
aagtttgattattctaaagatcaactcgtggacgacctcaattacctgaaaaaatggttc
gcctggcacgaagcatgggcacacaaagatgggaaaccggttatatttatttggaacgaa
aaagagtgcgaggttgcggagcgctgggtagctgctgcgaaagaggctggttggtatgtc
gttttaaagctattcggtcgatggaaggaatgcacaaaccaacccgatagttggcatcaa
tacggtgtatctgaaagctacctcgaatatacggacacttcgtttacaattggacctgga
ttttttaaggcaaatgcggatgaggccgaacatcctcgtgtctctcgagaattatggtgt
gaatgggtcgttaagatgaaagaaagtaaactaccatggcagttaattgtctcatttaat
gaatggggggaaggaacagccgtagaaagtgccgtagaatggaaaagcgattccggatac
ggaatctatttagattgtcttcatgatcctgtaagatacggatcacaaaaagaattatag
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