Fragilariopsis cylindrus: FRACYDRAFT_250799
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Entry
FRACYDRAFT_250799 CDS
T04784
Symbol
CHI8_1
Name
(GenBank) chitinase-like protein
Organism
fcy
Fragilariopsis cylindrus
SSDB
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Paralog
GFIT
Other DBs
NCBI-ProteinID:
OEU07772
JGI:
250799
UniProt:
A0A1E7EP72
LinkDB
All DBs
Position
Unknown
AA seq
2226 aa
AA seq
DB search
MMEGNKNSSTTTTTTTVTTSVSTATAAAVVASSTERVIPRRRMRSSAVKKQPPASIMIKE
SSAIPVIETATTPSITSAPSDEQQQETTTTSPSSKKKKAKSKTSKKSSLSSNGGSGGGGS
WQWDIPVVEVEGDDEDKVVDGNDESYTLLSPSKKKKSSNTSTSKKKTKNSVVLSPEEVYE
NLSKSPTKKSSKKKSSSKKFDNGNSSSNSDLTASIRDLVSSSETKEQEEPSSTTPTSSTK
KTKKSSKSKKKSASSSSSSGLDLLSPSSGGERLSSPKKKKSSKKKSMDNNKEKKRSPIAS
AKSRWMTNPSYKELDNDDDNFDGISSSSSLKTDETLKNPMYDDKLSSSTGNMNMTMTMMT
ANNKNRRPSSLLDPPELPLPKVAVRPPSLLDPPESPRADATTSSAVVDASTTTTATTSVV
DDIQISTISPWRTTSKPKVTASTASPSPSPSTTVVALAAKAVVAAAAEENKKKKKKLMMK
KQQNNKIINKPTTGGSKRSLFGIATGLDFTENDEIPYWSNRSRSNRPDDSSSSDDDDNNN
NNVVVVSSKPKVKEPEPELEPELEQPELEESFSDGIKRNPLISPWGGTPKTKVTEESSTT
ATATTASASASATATGTSNSSASASVSYSSLFPPPIDAGDKGRYGYPELNEIIDKNDDDT
DQQNPIADGNKNNNYDDSSSSIVIGDGIHRNRLSSPWARKAKQSTATITTTATGSASCSS
FLSPPIVTAGSGGKNDGGGDNNDDDDDANHKVRYGYPELNEIIDKNDDKNHQDTIGGGNN
NNVGSSSILSVDGIQRNPLSSPWARKAKISTVNTATGPRSSLSASYSSFLSPPIDIGGSG
NGGDANDRGRYVYPELKEIFTDDDDTHNRNKNNNNDSGVLGDGIQRNPLSSPWASKPKKS
VKKPSSSSPWAEAKHKLKPTRNALLMMGSSPLDDDNIEQEKGVLIDGIKLRQVSPQSKSS
PLSSRPILGVGRYMGTSLRSITSGDHSAVGGVDGIDASPVSPSATGTKKKKATNMSVLLP
PMNVGEDYKNNADFDDDDDISIDALVDLSPSLASSIHSLSLTSSYQQQKEQQQVVDQAEI
FERSVRDRLSLFGEPAGMMMSPPPQRKKKVASTSNTRRSFGYGVTSTKKGGLAGVVAVDM
NASSPTIMSTNPSSFSSTNSDYFASAAAPTAANTTNVAALSGAAFESLLRTGSDHSSASL
ASNRGVKPQASSSYIGGIGPVTIGIAGSSSDLSNDSADGLLSVKDRTKVWGGARRRGGSV
ASGTNKNTGQHGGSRGGDESSLGTGGSLSVGDQELFLSKTTSSEEYDDITMSMHASAPIL
SVKDRMRSWTKSPATKSSSKKGGIIPRSSTRRLSLPTIDQMTEDESITDDHEGSLDSNAP
SKARTWAVPSHVPAYANRRSSLKMVAPPAVDIQKQRQHASLGGSMASLPSLEWSNNSSSL
YSTGNLRKVDPQNLRPVGAGDTTNGTEHSISSIKFPTTILAVGNADISSNDSQEVKSNLH
DESLSERDDDHHMMESSSSLYLQKTLLRKVEPPRENKWKASRDDEINGSSHESLASSLYA
TAQLKKVEPSKEEKWKEPKNGDNNTAVLYSTQDLRPATYPIEDKWKEKEVIDSSETATEF
ELSESYDQGEMPTGETTGETKKDESKSVERPRDEDESGSELDVTDLQESSKSSGNKRLLM
LVSTTSGRQEQKTAQDRALTILKGMRIDPQHLEQLDGADPDPNIRERRNELFAISGIRAQ
YPQFFLVDANEKVKFLCTWDSFELMHDMDSLSESMNLDTHLISSSSIQKQDDVEEEMVGG
YVQDMESTLSSPGEAEVQDAQEVQDVISKENDVVVEAGSQDEAPAPASASEEVTGEEVTE
DEVVHNTTQEEVSTPSIDEVKDDEPPSTIGEDDAKVVDDEENIQPDDDVINDADVRNEAP
AALSQFNTEEVIIVKNIEGTIELEASLTDTDKVEDIIIPSSSPDGNVINEDQPMQIPKTV
ASICNEELQLDPIVDKSDTVVAVEEKEVHGDSNDIDNDNCNDAEGVTQISLDSFLETTPR
KQIIDQDHDAKDDLHDNNGDGDEDDDDFRIDLALRKTSFNAVGNEPPLPLDRRTSMVSES
GWSTDDDSNTIKSDYTDKSFGTIGSGAIVVDATSITSKEDAATKQLSKMAMAAAKINQKK
DENKAKQQDIVFTPSISNETTNNGDNNNEEEDAQKSNGFKKKKKNKNKKKKSNSSSSSKK
KKKKHN
NT seq
6681 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggtaataaaaacagcagcactactactactactactactgtcacaacaagt
gttagtactgccactgccgccgctgtagtagccagtagtaccgagagagtcattccacga
cgacgaatgcgttcatccgcagtcaaaaaacaaccaccagcatcaatcatgataaaagaa
tcatctgcaataccagtaatagaaactgccactacaccctcaataacatccgcaccatcg
gatgaacaacaacaagagacaacaactactagtcctagtagtaagaagaaaaaggcaaag
tcgaaaacatcgaaaaagtcatcattatcatcgaacggaggtagtggaggaggtggatct
tggcagtgggatattcctgtagtagaagtcgaaggagacgatgaagacaaagtagtcgac
ggaaacgacgaatcgtatactcttctttcaccatccaaaaagaagaagagtagtaatacc
agtactagtaaaaagaaaacgaagaatagtgttgttttgtcaccagaagaagtttatgag
aatttatcaaaatctcccaccaaaaagtcatcgaaaaagaaaagtagtagcaagaaattc
gacaacggcaacagtagtagtaatagcgatttaacagcttccattcgtgatttagtttct
agttctgagacaaaagaacaagaagaaccatcatcaactactccaacttcttcgacgaaa
aagacgaagaagagtagtaagagtaagaagaagagtgctagtagtagtagtagtagtgga
ctagatttactgtcaccatcatctggtggcgaacgtttgtcatcaccgaagaaaaaaaaa
agtagtaaaaagaagagtatggacaacaataaggaaaaaaagagaagtcctatagcaagt
gctaaaagtagatggatgacgaatccttcctacaaagaactcgataatgatgatgataat
tttgatggtatttctagtagtagcagtttaaaaactgatgaaacattaaagaatccaatg
tatgatgataaactatcatctagtactggtaatatgaatatgactatgacgatgatgact
gctaacaataagaatcgtcgtccatcatcattattggatccaccagaattaccactacca
aaagtagctgtgcgtcccccatcattattggatccaccagaatcaccacgtgcagatgca
actactagtagtgctgttgtcgatgctagtactactactactgctactactagtgttgtt
gatgatatacagatatcaacaatatcaccatggaggacgacatcaaaaccaaaagtaaca
gcctccacggcatcgccatcgccatcgccatcgacgacggtggtagcgttagcagcaaag
gcagtggtagcagcagcagcagaggagaataagaagaagaagaagaaactgatgatgaaa
aaacaacagaataataagatcatcaacaaaccaacaacaggaggaagtaaacgttcatta
tttggtattgcaactggtcttgattttactgagaatgatgaaataccatattggagcaac
cgttccagaagtaatcgtccagatgattcatcatcatcagatgatgatgataataataat
aataatgttgttgttgttagctcaaaaccaaaagtaaaagaaccagaaccagaactagaa
ccagaactagaacaaccagaactagaagaatcttttagtgatggtattaaacgtaatcct
ttaatttcaccatggggaggaacaccaaaaacaaaagttactgaagaatcatcaactact
gctactgctactactgcatcagcaagtgcaagtgcaactgcaacaggaacatccaattca
tcagcatcagcatcagtatcatactcatcattgtttcctccaccaattgatgcaggtgat
aaggggagatacggttatccggaattaaatgaaatcatcgataaaaatgatgatgataca
gatcagcagaatcctattgctgatggcaataagaataataattatgatgatagtagtagt
agtattgtaatcggtgatggtatacaccgcaatcgtttaagttcaccatgggcaagaaaa
gctaaacaatcaactgcaactattactacaactgcaacaggatcagcatcatgttcatca
tttttatctccaccaattgttacagctggtagtggtggtaaaaatgatggcggcggcgat
aataacgatgatgatgatgatgccaaccataaggtgagatacggttacccagaattaaat
gaaatcatcgataaaaatgatgataaaaatcatcaggatactattggtggtggtaataat
aataatgttggtagtagtagtatcttatccgttgatggtatacaacgtaatcctctaagt
tcaccatgggcaagaaaagctaaaatatcaactgtaaatactgcaactggaccaagatca
tcattatcagcatcatattcatcatttttatctccaccgattgatataggtggtagtgga
aatggcggtgacgccaacgatagggggagatacgtctacccggaattaaaagagatattc
accgatgatgatgatactcataatagaaataaaaataataataatgatagtggtgtattg
ggtgatggcatacaacgtaatcctttaagctcaccatgggcgagtaaacctaaaaagtca
gtgaagaaaccatcatcatcatcaccttgggcggaagcgaaacataaattaaaaccaaca
aggaatgcattactgatgatgggttcatcacctcttgatgatgataatatagaacaagaa
aaaggagtcttgattgatggtattaaattacgacaggtatctccacaatcaaaatcctca
cccttatcatctcgtccgattcttggtgttggacgttatatgggtactagtttacgatca
ataacttccggtgatcattcggctgttggtggtgttgatggaattgatgcttcacctgtt
tctccttcggcgacaggaacaaaaaagaagaaagctactaatatgagtgtattgttgcca
ccaatgaatgtcggcgaggactataaaaacaacgctgatttcgatgacgatgatgatatt
agtattgatgctcttgttgatctatcaccatcattggcatcgtccattcatagtttatca
ttgacttcgagctatcaacaacagaaagaacaacaacaggttgttgatcaggcagaaata
tttgaacgatccgtgagagatcgtttatctttatttggtgaaccagcaggtatgatgatg
tctccaccaccacaaagaaaaaagaaagtagcatcaacgtctaatacgcgtcggtctttt
ggatacggcgtaacatcaacgaagaaaggtggattggccggagttgtcgctgtcgacatg
aatgctagttctcctactattatgagtactaatccatcatccttttcaagtacaaattca
gattattttgcttctgctgctgctcctactgctgctaatacaaccaacgttgccgcgttg
tctggagcagcatttgaatcacttcttcgtacaggtagtgatcatagctctgcttctcta
gcctccaatcgtggtgtgaaacctcaagcgtctagttcctacattggcgggatcggtcca
gtgactatcggtattgctggatcatcaagtgatttatcaaatgattctgctgatggtctt
ttgagtgtgaaagatcgaacaaaggtttggggtggtgctcgtaggcggggtggtagtgtt
gcatcaggtacaaacaagaataccggacaacacggcggtagtcgaggaggagatgaatcg
tcgttaggtaccggtggtagtctatcagtaggggatcaagaattgtttttgagcaagaca
acatcttctgaagaatacgatgacataacgatgagtatgcatgcctctgcaccaattctg
agtgtcaaagatcgcatgagatcatggacgaaatcacctgcaacgaaatcatcgtcaaag
aaagggggtatcatcccgaggtcatcaacgagaagactgtcgttacctaccatagatcaa
atgacagaagatgaatcgataacagacgatcacgaaggaagtttagatagcaacgctcca
agcaaagcacgaacatgggcggtaccatcgcatgtaccagcatacgccaaccgtcgatca
tcactaaagatggtagcaccacccgccgtggacattcagaagcagcgacaacatgccagt
cttggtggctctatggcatcactgccatccctcgaatggagtaataattccagtagctta
tattcaactgggaatcttaggaaggtagatccccagaatttacgtcctgttggtgccggg
gataccaccaacggtaccgaacattcgatatcctcgattaagtttcctactactattctt
gcagtaggcaacgctgatatatctagcaacgacagccaggaggttaagagtaatttgcat
gacgagtctctcagcgaacgagatgatgatcatcatatgatggaatcatcttcttcattg
tatctccaaaaaacgctactacggaaagttgaaccgccaagggaaaacaaatggaaggca
agtcgtgatgacgagatcaatgggagtagccacgaatctttggcgtcatctctttatgcc
acggcacagctgaagaaggtcgaaccttcaaaagaagagaaatggaaggaacctaaaaat
ggcgataataatacagccgtgctatattcgacgcaggacctacggcctgcaacgtatcca
atcgaagataaatggaaagagaaggaagtgattgattcatccgagacagcaacagagttt
gaactttcagaatcttatgatcaaggagaaatgcccactggtgaaactacaggagaaacc
aaaaaggacgaatcaaaatccgtcgagcgtccgagagatgaagacgaatcaggatcggaa
ttagacgttactgacctccaagaaagttcaaagtcaagtggcaacaagagattgttgatg
ctagtttcgacaacatcgggacgacaagagcagaaaacggcacaagatcgggccctcacc
atattgaaaggcatgcgaatagatcctcaacatcttgaacagctcgatggagccgacccc
gacccgaatattcgtgagcgacgaaatgaattattcgccataagcggtatccgtgcacaa
tacccacaattcttcctagtagatgctaatgaaaaagtcaaatttttatgtacgtgggac
tcatttgaattaatgcacgatatggacagcttatcagaatccatgaacttagatacgcac
ctgatatcatcttcttctattcaaaaacaagacgatgttgaggaggaaatggtcggtgga
tatgtgcaagatatggagtcaacattatcttcgcctggggaagcagaagtgcaggatgca
caagaagtgcaggatgtgatctccaaagaaaacgatgttgttgttgaggcaggttcacaa
gacgaagcgccagcaccagcttcggctagtgaagaggtaacgggtgaagaggtaacggag
gacgaagttgtgcataacactacacaagaggaagtatcgacaccttcgatagatgaagta
aaggatgatgaaccaccgtcgactataggagaagatgacgcgaaagttgtcgatgacgaa
gaaaatatacaaccggatgatgatgtcattaatgatgctgatgtacgtaatgaagcacca
gcagcactatcgcaatttaatacagaggaagtcatcattgtcaaaaacatcgaaggaaca
atagaacttgaagcttctttgactgatacagacaaagtggaagatatcatcattccatca
tcttcacccgatggaaacgtaatcaacgaagaccagccaatgcagattccaaagactgtc
gcatctatttgtaacgaagaactccaattagatccaattgtagacaagagtgatactgtc
gtagcagtagaagagaaagaagtccatggtgatagcaacgacatcgacaacgataattgc
aacgacgcagaaggtgtaactcaaatttcacttgattcatttcttgagacaactcctaga
aagcaaattattgatcaagatcatgatgcaaaggacgatttacatgataataacggcgat
ggcgatgaagacgatgatgattttcgaatagatcttgcattacgaaaaacctcattcaac
gctgttgggaatgaaccacccttgccactagatcgacgtacatctatggtatcggaaagt
ggatggtctacggatgatgattctaatacaataaagtcagattatactgataagtcattt
gggacgatcggcagtggtgcaatcgtagtcgatgcaacatcaattacttccaaggaagac
gccgcaacgaaacagttatcaaaaatggctatggccgccgccaaaataaatcaaaaaaag
gatgaaaacaaagcaaaacaacaagatattgtatttacaccttctatatcaaacgaaaca
acaaacaacggtgacaacaacaacgaggaggaggatgcgcaaaaaagtaatggttttaag
aaaaaaaagaagaacaagaacaagaagaagaagtcgaatagtagtagtagtagtaagaag
aaaaagaagaaacataattaa
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integrated database retrieval system
