Fragilariopsis cylindrus: FRACYDRAFT_261430
Help
Entry
FRACYDRAFT_261430 CDS
T04784
Name
(GenBank) hypothetical protein
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIS_M
SPOC
SeqA_N
Motif
Other DBs
NCBI-ProteinID:
OEU16925
JGI:
261430
UniProt:
A0A1E7FFV4
LinkDB
All DBs
Position
Unknown
AA seq
2307 aa
AA seq
DB search
MNDFLTEKPPPDWQYQQQKSNTLGHFPRLFAEKNQLWCLLSKKVEISPAEVLIDYNTQPH
SGCLQYSMTSTTKLSDAKYREWALNLVGKDWEIYWQEDEEDDETDTNDKEQERQQETTPS
TSSSPTTTASGQETAEEEKKKKECIPANAVEMEIEVPSNESMSIEGDKEEKEKLIESKEK
KKEKNDDDASQGSIIDDWYDGHILGIIDDTTTTTSSPRDNGWKFRVNFVGDEQTYSICIV
PGKIRPSARGWVQRTVALLKPPPAAGENQNNNNNKWDDEYESKLPPDTSTLDDKESLQTL
KSKITTTNLSIGNDGGAAMMERGLHGEHTTSSSNNNNKELAVALPTYNDFRRIQLLRYLL
ESQILLREKLPKIENHEDIFTDGIRNPTENYVNYLIICCKDLSQACSWYCKSWKLLFHFF
SSSSSSGSGGGGGGGGVDSSSSNHDDNSSARAPSAPTYSKIINEGEEDLQLDRLTFNGLI
SEYLEFGKDTILNTAMIDVNASAPSTKRRQAIKPISGPTRRTKRRRKQLASEGANDGIGE
ILTAASNLDTDIMSTSFVDIFVNTVSENKQYRHIGSLGNMLQSLSHLVVYPLVSWKSQVG
RILGNKEDADLIPSSNNGNIDTKSPHNDEEKDNSNGKSEVKMEDDELSLEREDEEIDEMF
TYEEIQTCLSAIRNSRVLSRFNLFDDVHKLHAKLRDVETNQTDALELIKRLGVETPEGDK
RQDDEVLSGLTAILNEMNYPKSTLYNVDSLGSTQTHNGTESLIITRDDLSNAIELRSWFV
DVKRVRSVRERLIFVRRLISKIESNSLPDPQNIPVIANLSQISQQRDASIQNVLEMQTAL
KNYNDIIEKRENDFLASSVQITNSSDRKSHLNFLRSTSTQLKECPVILPLEEQVATRIDV
IKWYEEASAILLKLKSSKENIASFVDVKNQYESLRIILRGLSSTRTKLIEGVESNDKADE
EICKFILSDMNHICETTANEVRRLYDLAYSWKERADSIISCLRMYGNLNAGEALCILKPP
AMVDVKRIADLSEEYLALPIQIPGYIEQLQNVQSEAYDWSQNIYNTLLESDRVSFTNALS
FIEKERDHRPKGIIVDPNRSIMDSIVDLLSWYEKVRTAIVLVSGEMKHRSIQDDASAIAA
AYSSLIIDKIYNILADGTEALEIYCGAYKTSNGITGKFKAKSDQSLTILDKLFHLRKTSR
APSREKIDSSELMNSLFSRMYSKDKTEGFPFHVMLWFNWHLVVADLISQLDDGKKLNLPQ
DQVLVPSLVRAKQLKAQEPLIPDDTSISDATDTRSVIRTKSSELLDFDRIIEEAQNEEVC
IKDALSKAKDLLRGSFEKVEHIREHLSKLKELLAMTKDRSLGKGGLTLNAIFESQLDEHI
RYFGWLVKTLQYPVLHEAEASYSSFTNEAEIGSSRIPWDALTHIHDRIPNELSGCRESTL
CIMRVKELYRAAKRWQDEISRTTMISNRGNKRRGAIASYQENLSQDDTEDVEKDEKLRME
KMELLAKDWVLSKVVMPRQKAVNSMIDTSRKFEVQLQNFLAQDFDGNQDNAPLPKGNSLV
GPNGQFILYRLTGSSLFSMMQTSVQSLSEVGDKVFAETPGKATFDWMRSAVAWIERLHAA
VITQSNFTHTNGRLLVIPAIDAKQLCESGESVFLQTSDDIRHTLSNHGIYVSTNSVKKRL
KVTLKKDGAHHSVGGIIIRWCPILFDALRADVSKLESWEKGLTKMIDEFNAFVATAQTQI
KDDEDALFQWYRFRVKVQSALDEGQNSLVVSPTKEVVDSFTNLLNVIINYLDKNCSRELN
ELFSKRLFSLNTSLYDDRFVLLDALLYRRESAGDHIDADVDTTLFPALEPETTFRDTCRS
NLERAFLKAASVLNLESGEDSGIEDLSALKAWEIENEMFERFQDDFGTTRVSEEYRVKIR
SLKCNLENPNNISLCLNVLTSDIKANALVKMTSYQLASQKAKAEIEKAKKAALKDIVLTP
GAEDAVDISTTSSNHSPSNLKPTPPGTDYIAGILKPSSVLSVLNQGGMVNLEVRSDEKLD
DEVSEEIDMDMEADGAPTLYSDDEELVGSSPKISSTSQESSTIKTAPGHSSSPSSTLSAS
SSEGTYSKQTDRSPPPPPPPSLANSFYTSVGDVDHDSSSVDDSNSQSGVNRGTRINNAFG
GKTFRIEIHGSVKYAFSAAFYQEDASQSSVERYMSESLTQKGRSKIEDFNRFVSEKLRGG
RWQATCLRLTTISDKDTEVYKAFYKEFETKERIAMFKLYGESGSKLFLVTPKFHEIAKET
RLINFAIKGSTYAIVLTKKDDGNIWKD
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattttcttactgaaaagccacccccagactggcaataccaacaacaaaaatcc
aatacattggggcactttccaaggctttttgctgagaaaaatcaattgtggtgcctcttg
tcgaaaaaagttgaaatttcaccagcagaagtattaatagattacaacacgcagccacac
tcggggtgcctacaatacagtatgacgtcgacgacaaagctctctgatgccaagtatcga
gaatgggcattgaatttggtgggaaaagattgggaaatttactggcaagaggatgaagaa
gacgatgaaacagatacgaacgataaagagcaagaacgtcagcaggaaactactccatca
acatcttcatcacctactactaccgcatccggacaagaaactgcagaggaagaaaagaaa
aagaaagaatgtattccagcgaatgctgtagaaatggaaatagaagtcccttcgaatgaa
agtatgagtatagaaggggacaaagaagaaaaagaaaagttgattgaaagtaaagaaaaa
aagaaagagaagaatgacgatgacgcgagccagggaagtatcatcgatgattggtacgat
ggtcatatcttgggaatcatcgacgacacaacaacaacaacgtcctcaccgagagacaac
ggctggaagtttcgagtgaactttgttggtgacgaacaaacatatagtatttgtatagtc
cccggtaagattcgaccaagtgctcgagggtgggtccaaagaactgtggctctattaaag
ccaccacctgcggcaggagagaatcagaacaacaacaacaataagtgggacgatgaatat
gaatccaaactccctcccgatacgagtaccttagacgataaggaaagcttacaaactctg
aaatcgaagattactactacgaatctatcgataggaaacgatggtggtgctgctatgatg
gaacgtggattgcatggcgaacacaccaccagtagcagcaacaataacaacaaagaactt
gcagtagccttacctacatataatgactttcgacgtatccaacttcttcggtacttatta
gaatcgcaaatattacttcgagagaagctaccaaaaatcgagaaccatgaggacattttt
acggatggtatacggaatcctacagaaaattatgtcaattatctgataatatgttgtaaa
gatttgtctcaggcatgttcatggtattgtaagtcttggaagcttctgtttcatttcttt
agtagtagtagtagtagtggtagtggtggtggtggtggtggtggtggtgtagatagcagt
agtagtaaccatgatgataatagtagtgcacgtgcacctagtgcacctacatacagtaaa
ataatcaatgaaggggaggaagacttacaacttgataggttgacatttaatggattaatc
agtgaatatctcgaatttggaaaagatacaatccttaatacggcaatgatagacgtaaat
gcttctgccccctccaccaaaagacgacaggcaataaagccaatatcaggtcctactcga
cggactaagcggaggaggaagcaattggcatctgaaggagctaacgatgggatcggggaa
atccttaccgctgcttcgaatctcgatacggatatcatgtctacatcctttgttgatatc
tttgttaatactgtttccgaaaacaaacaatatagacacattggatccttgggaaatatg
ttacaatccttatcgcatctagtagtctaccctctagtttcttggaaaagccaagtgggt
cgcatattaggaaacaaggaagatgcagacctgattccaagcagtaacaacggtaatatc
gatacgaaaagcccccacaacgatgaagaaaaggacaactccaatggcaagagtgaagta
aaaatggaagatgacgaattatcgttagaaagggaagacgaggagatagacgaaatgttc
acttatgaagaaattcaaacatgcttatcagctatacgaaatagccgcgtcctctctcgc
tttaacttgtttgatgacgttcacaagcttcatgcaaaactccgtgatgtcgaaacaaat
cagacagatgccttggagctgatcaagcgtcttggagtagaaacacctgaaggagataag
cgccaggatgacgaagttttgtccggcctgactgcgattttgaatgaaatgaattatcca
aaatcgactctttataacgttgattcactgggtagtacgcagacgcataatgggacagaa
tcattgattattactcgggatgatctttctaacgcaatcgagctcaggtcgtggtttgtt
gacgtaaaacgtgtccggtctgtcagagaaagactaatttttgttcgtcgattgatatcg
aaaatcgaatccaattcgctacctgacccccaaaatatacccgtaatcgccaacctctct
caaatatctcagcaacgagatgcttcgattcagaatgttttagagatgcaaacggctcta
aagaactacaatgatattattgaaaagcgagaaaacgatttcctcgcaagctccgtacag
attacaaatagttcagatcgaaaatctcatctgaactttttgcgttcgacctcaactcaa
ttgaaggaatgccctgtgatattacctcttgaagaacaagttgctacccgaattgacgtt
attaaatggtacgaagaagcgagtgctattctactcaaactgaaatcttcaaaagaaaat
atagcttcattcgttgatgtgaagaatcagtatgagagcctccggattattttacgtggc
ttatcaagtacgagaacaaaactaattgaaggtgtcgagtctaacgataaagcagacgaa
gaaatctgcaagtttatattaagtgacatgaatcatatatgcgaaacaactgcaaacgaa
gtaaggaggctttatgaccttgcgtattcgtggaaagaacgtgcagattctatcatatca
tgcctccggatgtatggtaatttgaacgccggtgaagccctctgcatattgaaacctcca
gctatggtcgacgtcaaaagaattgcagatttgtctgaagagtatctggctttgcctatt
cagatccctggttatatcgaacaactgcaaaatgtccagtcagaagcctacgattggtca
caaaatatttataatacactgttggagagcgatcgtgtttcatttacaaacgcactctct
tttatagaaaaggaaagagaccaccgtccgaaaggaattattgtagacccgaaccgatct
attatggattcaattgttgatttgctttcttggtacgaaaaagtaaggacagcaatcgtc
ctcgtgtcgggggaaatgaagcatcggtcaatacaagatgatgcaagtgcaatagcagct
gcgtactcatctctgattattgacaaaatttacaacatacttgctgatgggacagaggca
ttggaaatatattgtggtgcctacaagacatcaaatggaattactgggaaattcaaagca
aaatcggatcaatctttgactattcttgacaaactttttcatctacggaaaacatcaaga
gctccatcaagagagaaaattgattctagcgagcttatgaattcgcttttttcgcgcatg
tattccaaagataaaacagaaggatttccttttcacgttatgctctggtttaattggcat
ctagttgtcgcagatttaatatcgcaactggatgacgggaaaaaattaaacttaccacaa
gatcaggtgcttgtaccgtcattggtaagagctaagcagctcaaagcgcaggaaccgctt
attccagatgataccagtataagtgatgctacagatacccgtagcgtcattcgaacaaaa
agctcagaactattagattttgatcgaatcatcgaagaagcacaaaatgaagaagtatgc
atcaaagacgcgctatcaaaggcaaaggatctattgcgtggatcctttgagaaggtagaa
cacattcgcgaacatttaagtaaactcaaagaattgcttgctatgacgaaagatcgctcg
ttgggaaaaggaggcctgacgttaaacgcgatttttgagagtcaacttgatgaacatatt
agatattttggctggcttgttaaaaccttacagtacccagtacttcacgaagcagaggca
tcgtactcttctttcactaatgaagctgaaattgggtcaagtaggattccatgggatgcc
ttgacccatatccacgatcgtattccaaatgagctttccggatgtcgtgaatctactctt
tgcatcatgagagtgaaggaattgtatcgagcagcaaaaaggtggcaggacgaaatctcc
cgaactacaatgatatcgaacaggggtaacaaacgtaggggagcaatagcgtcgtatcaa
gaaaatttgagtcaagatgatactgaagatgtagagaaagacgagaagctccgtatggag
aaaatggaattacttgcaaaggattgggttctatcgaaggtcgtcatgccaagacagaaa
gctgtaaattcaatgatagacacctcaaggaaatttgaagttcagctacaaaattttctt
gctcaagatttcgacggcaaccaggataatgctcctctaccaaaagggaattccttggtt
ggacccaatggtcaattcatcctttatagactgactggtagttccctgttttcgatgatg
caaacttctgtgcaatcactttcagaggttggggataaagttttcgctgaaacacctggt
aaagcaacttttgactggatgagatctgccgtagcttggatcgaacgtttgcacgcagcc
gtgatcacacaatctaatttcactcataccaatggaaggcttctggttatacctgcaatt
gatgcaaagcagctttgcgaatctggcgaaagcgtatttttgcaaacaagcgacgacata
aggcataccctatcaaatcatggcatatacgtttcaacgaattcggtgaagaaaaggttg
aaggttacgctaaagaaggatggtgcccatcattctgttggtggtataattatccgttgg
tgtccaattttatttgatgcattgagagctgatgtctcaaaactagaatcgtgggagaag
gggctaacgaaaatgattgacgaattcaatgcatttgttgccacagctcagactcaaatt
aaagatgatgaagatgccctatttcaatggtaccgctttcgtgtgaaagttcaatcagcc
ttagatgaaggccagaattctcttgtagtatctccgacaaaggaggttgttgactctttt
actaatcttctcaatgttataataaactatcttgacaaaaattgttctcgcgagcttaat
gaactattttcgaaacgattattttcgctcaatacatctctttatgacgatcgattcgtc
cttctggatgctctactgtacaggcgggaatcagctggcgaccacattgatgctgacgtt
gatacaactttatttcctgcccttgaaccagaaacgacttttcgagatacatgtagatca
aatttggaacgagccttcttaaaggcagcatcagtcttaaatttagaatctggggaagat
tcgggtatcgaagatctgtccgcacttaaagcatgggagatcgagaatgaaatgtttgag
agattccaagatgattttggaacaactcgtgtttcagaagaatatagagtgaaaattcgg
agtttgaaatgcaatctcgagaatccaaacaatatatcgttatgtctcaacgtacttaca
tctgacattaaggctaacgccttagtgaagatgacatcgtatcagttggctagccaaaaa
gcaaaggctgaaattgagaaggctaaaaaagccgcattgaaagatattgtgttgactcca
ggagctgaggatgcagtggacattagtacgactagcagcaatcacagtccatcgaatctt
aaacccacacctcccggtacagattatatcgcaggaattctgaagcccagcagtgttcta
tcggtactaaatcaaggaggaatggtaaatctggaggtgcgatcggacgagaaattagat
gacgaagtcagcgaagaaatcgacatggatatggaagccgatggcgcgccaaccttatat
agcgatgatgaagaactagttggatctagtccaaaaatttcctctacttcacaagaaagt
agcaccataaaaaccgctccagggcatagttcctctccgtcttctacgttgtcagcttca
tcttctgaagggacatactcaaagcaaacagaccggtcaccgccgcccccaccaccacct
tccttggccaattctttttatacgtctgtgggagatgttgatcacgactcctcatcagtc
gacgactcgaattctcaatctggagtaaatcgggggactcgtatcaataacgcattcggt
ggcaaaacattccgcatcgagatacacgggagtgtgaagtacgcgttctcggccgcattt
tatcaggaggatgcatcgcaatcatccgtcgaaaggtatatgtcagaatcattgacccaa
aaaggtagatccaaaatcgaagattttaatcgtttcgtttcggaaaaactcagaggtggg
agatggcaagcgacctgcctacggttgacaacaatcagtgacaaggataccgaagtttac
aaagctttctataaagagtttgaaacgaaagaacgaatcgccatgttcaaattgtacggt
gaatctggaagtaaactattcttggtgacaccgaaatttcacgagattgccaaagaaaca
agattgatcaactttgcaatcaagggtagtacatatgctatcgtattgaccaaaaaagat
gacggaaatatctggaaggattga
DBGET
integrated database retrieval system
