Fragilariopsis cylindrus: FRACYDRAFT_274870
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Entry
FRACYDRAFT_274870 CDS
T04784
Name
(GenBank) Sec1-like protein
KO
K15292
syntaxin-binding protein 1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_274870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_274870
Membrane trafficking [BR:
fcy04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
FRACYDRAFT_274870
SNARE
SNARE associated proteins
Syntaxin-binding proteins
FRACYDRAFT_274870
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_274870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-ProteinID:
OEU18713
JGI:
274870
UniProt:
A0A1E7FLM4
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSSARRSGGSARNKPSSAFTSGGGSSARPTSSSSGSSSRPSSSSRPSSSSSSSSRPTSSS
RPSSKSSSSSSRKSSAAAPRTSRTSGYSSRDSNAGPQIPQQSLMEVVRKRFTDDVFQSAA
NAHPGWKVLIVDEPGMKVISAAVGMYDIMEQQVSIVESLERKRAPFKDMAAIYILAPTNE
SVQKLLDDYADKTKILYGPAVFLYFLGPIPKQLMHQIKQCKQLVKRLKAVAEVNVDFLMR
EQRSFVLDMNDPFASLIRGGGMSPTEMKMAEKLVTLCATLNEYPYIRFKQKSKVCSSLAD
LFKMKMDEYVGSNPAWWYHGSGNCPAKNSERDRSTLLLLDRSSDCLTPLMHDFTYQSMVN
DLLTIEGDKITYKAESQENPSIKEDKDVLLNDKDKLWVEMRGNHIAQVIEVLSGRIQDVV
NSSTNSALRKKSGSNMSLSQLASAMKELPEYREVMSKLGQHMHIAHDCMDKFNKLGLLDL
SDVEQTLATGKDDDDRTVKTAETISRCESALIRIQDPDDRLRLMLIATISQGGLSRGDKD
RLLRAAQLGRKELQTLESLSKIAMDSINNNAASPTAAKDGKKGFLGRSSSDDSVDDDEEE
SEYASSRYVPPLKGILKALVSNQLDFQEYPSVIPMPASSASSSVGVTSSARSSRKKGGAS
TDKWGKSKSSGDSKGKGSYEGGRNIMFMVGGLSFSELRVTRDVMEKQSREIIAGSTKFVS
PEEFMDDLKTLTS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgcaagacgatctggcggcagtgctcgtaataagccttcatcggcattcact
tcgggtggggggtcctcagcacgaccgacgagctcttcatcggggtcatcatcacgacca
tcgagttcctcaagaccctcatcatcatcgtcgtcgtcatcaagaccgacaagctcctca
agaccgagctctaaatcgagttcttcttctagtaggaaatctagtgcggctgcaccacgt
acttctcgtactagtggttatagtagtagagatagtaatgccggtcctcaaattcctcaa
caaagtttaatggaggttgtacgaaaaagattcacagacgatgttttccagtctgctgcc
aacgctcatccaggatggaaggtcttaatcgtggatgaaccaggtatgaaagttatttca
gcggctgttgggatgtatgatattatggaacaacaagtttccattgtcgagtctttagaa
aggaaacgagcacccttcaaagatatggctgctatttacattcttgcgcctaccaatgaa
agtgtccaaaaattgttggatgactatgccgataaaactaaaatcctatatggacctgct
gtgtttctttattttctgggccctatcccaaagcaattgatgcaccaaattaagcaatgt
aagcaactcgttaaacgtctaaaggctgtggccgaagtcaatgttgatttcttgatgaga
gaacaacggtcatttgtactagatatgaacgatcccttcgcttcactgattcgaggtggt
ggaatgagtcccacggagatgaaaatggcagagaaacttgttactctttgtgcgacccta
aatgaatacccttacattcgattcaaacaaaaatcgaaagtttgtagcagtctagctgat
ttgttcaaaatgaaaatggacgaatatgtcggttcaaacccagcatggtggtatcacgga
agtggaaattgtcccgcaaagaactcagaaagggaccgctctacgttattattattggat
cgctcttcggactgtttgacaccattgatgcacgactttacatatcaatctatggtcaac
gacttgctgaccatagagggtgataaaatcacatacaaagcagagtcgcaagaaaatccg
agtattaaggaagataaggatgttttgctcaacgataaggacaaattgtgggttgaaatg
cgagggaatcatattgcgcaagtaatagaagttttatcgggtagaattcaagatgttgtc
aattcgtcgactaatagtgctcttcgcaaaaaaagtggatcgaatatgtcactttctcaa
cttgcatcggccatgaaggaactaccagagtatcgtgaggtcatgtcaaagcttggtcag
cacatgcatattgcccatgactgtatggataaattcaacaaacttggattgctggacttg
agtgacgtagaacaaaccttggctacaggaaaagacgatgacgatcgaactgtgaaaact
gcagaaacgattagcagatgcgagtccgctctgatccgtattcaagatccggatgataga
cttcgtttgatgctaatagctacaattagtcagggtgggttaagtaggggcgataaagat
cgcttacttcgtgcagcacagcttggccggaaggagttgcaaacgttggagagtctcagc
aagattgcaatggattcaattaacaataacgctgcgagtccaaccgcagctaaagacggc
aaaaaaggtttcctcggtaggagttcctctgatgattcagtcgacgacgacgaagaagaa
agtgagtatgccagtagccgatatgttccaccgctcaaagggatactgaaagctcttgtg
tcgaatcagctcgattttcaagaataccccagcgtcattccgatgccggcatcatccgct
tcatcatcggtcggtgttactagtagcgcacgcagctctagaaaaaagggtggagcatca
acggacaaatggggtaagagtaaaagttccggagattcgaaaggtaaaggatcttacgaa
ggaggacgtaatattatgttcatggtcggtggtctctctttttcggaactacgcgttact
agggatgtcatggaaaaacaatcccgagagatcattgctggttcaacaaaatttgttagc
cctgaagaattcatggacgacctgaagacccttacatcataa
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