Fusarium falciforme: NCS54_01011200
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Entry
NCS54_01011200 CDS
T09198
Name
(RefSeq) Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ffc
Fusarium falciforme
Pathway
ffc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NCS54_01011200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffc03041
]
NCS54_01011200
Enzymes [BR:
ffc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCS54_01011200
Spliceosome [BR:
ffc03041
]
Complex C
Other components
Step II factors
NCS54_01011200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
ABC_tran
PhoH
SRP54
DUF1509
Motif
Other DBs
NCBI-GeneID:
77796061
NCBI-ProteinID:
XP_053011407
LinkDB
All DBs
Position
8:complement(894340..897921)
Genome browser
AA seq
1193 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSELQNHVGVGDKTLAEFLIAQRLECSSFNEFRERLAGIAPDFP
PSLVESLDRLVLAMHPKFKGKNGAQDEEHHHTRTLEEKEKVFSGLALPDKDPVPDGGADV
IDDTLALLEGLEGKAKKDKSVRKRSRSPEDDQKDSRRRRRDRSRSRDRRRRDKYRSRSRS
QERGDEDWRDGYRDSRKDRRGRRRYDDDDDDRFRNAPAPEMDDAPQLHKVYEGHVTGIKD
FGAFVNLHNVRGKVDGLVHVSRMVAGQRVSHPSDLLTRGQQVWVKVTSIEGSRVGLSMKD
VDQENGQDLEPQARMTTGANMEALGGGARNGFVDPSAGPRDNLGPPRRQKKRMTSPERWE
IRQLIASGVAKASDYPDLEEDYNATLRGDGEMELEEDVDIEVREEEPPFLAGQTKQSLEL
SPIRVVKAPDGSMNRAAMSGTALSKERKELKRQEAEVAAKEEPKENLATAWQDPMADPDK
RQFASDLRNARKNQQSEEVPEWKKAVIPKGQSLGKRTNLSIKEQRESLPVFVFRSQLIKA
VQENQILIVVGETGSGKTTQLTQYLAEAGFANDGMIGCTQPRRVAAMSVAKRVAEEVGCK
LGEEVGYTIRFEDCTSPATKIKYMTDGMLQREILVDPDLSRYSCIMLDEAHERTIATDVL
FALLKKTLKRRPDMKVIVTSATLDADKFSAYFNECPIFTIPGRTFPVEVLYSREPESDYL
DAALVTVMQIHLTEPKGDILLFLTGQEEIDTACEVLYERMKALGPNVPELIILPVYASLP
TEMQSRIFEPAPPGSRKVVIATNIAETSITIDEIYYVVDPGFVKQNAYDPKLGMDSLVVT
PISQAQANQRSGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSTTILMLKAMGI
NDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAKVLIAAV
ELECAEEVLSIVSMLNISTVFYRPKEKQSQADQKKAKFHDPHGDHLTLLNVYNSWKHSGY
SAPWCFENFIQARSMRRAKDVRDQIVKIMDRYKHPIASCGRATEKVRRALCAGFFRNAAR
KDPQEGYKTLTEGTPVYLHPSSALFGKQAEWVIYHELVLTTKEYMHCTTSIEPKWLVEAA
PTFFKVAPTDRLSKRKKAERIQPLYNKFANEDDWRLSAQRKGGRGGGGGGTWG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccttttgaaccttgagcttttgtcgctcgtctcaaaggtcacgtcggaactc
cagaaccacgtcggtgtcggcgacaaaaccttggccgagttcctgatcgcgcagcgtcta
gaatgcagttccttcaacgagttccgcgagagactcgcgggcatcgccccggactttccg
cccagtttagtcgagagccttgaccgccttgtcctggctatgcacccaaagttcaagggc
aagaacggcgcccaagacgaagaacaccaccacacgcgaacgctcgaggagaaggagaaa
gtcttcagcgggcttgcgctgccggataaggaccccgtacctgacggtggagccgatgtg
atcgatgataccctggcgcttctcgaaggcttggaaggaaaggcgaaaaaggacaagagc
gtgaggaaacggagtcgaagccctgaggacgaccagaaagattcaaggcgcaggagaaga
gaccgatcgcgctcgagagaccggcgcaggcgagacaaatatcgatcgcgatcgcggtcg
caagaacgaggcgacgaagactggcgagatggctatcgcgattcgcgcaaggaccgacga
ggtcgtcgacgatatgacgacgacgacgacgaccgcttccgcaacgccccggcgcccgag
atggacgatgcgccacaattacacaaggtctacgagggacatgttacaggcatcaaggac
tttggcgcctttgtcaacctgcataatgttaggggcaaagtcgacggtttggtccacgtc
tcgcgcatggttgctgggcagcgagtcagtcacccctctgatctcttgacacgaggacaa
caggtctgggtgaaggttacaagcatcgaagggagcagagttggattgtcgatgaaggac
gttgatcaagaaaatggtcaagatctggaaccgcaagctcgcatgacaactggtgccaac
atggaagcactgggaggaggagcaagaaatggcttcgtagacccatcagccgggccacga
gacaacttgggcccgccacgacggcaaaagaagagaatgacatcaccagagaggtgggag
ataagacagttgatcgcatcaggagtagccaaggcttctgactaccccgacctggaggaa
gactacaacgcgacgttacgcggcgatggcgaaatggagctggaagaggatgtcgatatt
gaagtgcgcgaggaggagcctcctttcctggctggccaaaccaagcaatcgcttgagctg
tcaccaattcgagtcgttaaggcaccggacggctccatgaaccgagcagccatgtcagga
actgccttgtccaaggagcgaaaggaactgaagcgacaggaagctgaagttgctgctaag
gaggagcctaaggagaatcttgctaccgcgtggcaggatcctatggcagaccccgacaag
cgacaatttgccagcgacctcaggaacgcgagaaagaaccaacagtcagaagaggttccc
gaatggaaaaaggccgtcattccaaagggccagtccctgggcaagcgtacaaacctgagc
atcaaggagcaacgagagtccttgcccgtctttgtcttccgaagtcaactcatcaaggcc
gttcaggagaaccaaatcttgattgttgtcggagagacaggttctggaaagacaacacag
ctgacacaatacctggctgaagctggttttgccaatgatggcatgatcggctgcacccag
cctcgtcgtgtcgctgccatgtcagtcgccaagcgagtcgctgaagaagttggctgcaag
cttggagaagaggttggctacacaatccgtttcgaagactgcacaagcccggccaccaaa
atcaagtacatgacggatggtatgcttcaacgtgagattctcgttgatccagacctatca
agatactcgtgtatcatgctcgatgaggcccacgagcgtaccatcgctaccgatgtgctc
tttgctttgctgaagaagacactcaaacgacgacccgacatgaaggtgattgtcacttct
gcgactctcgatgccgacaagttctcggcttactttaacgaatgtccaatcttcaccatt
cccggccgaacattccctgtcgaagttctctactccagggagcctgaatctgattatttg
gatgcggctctggtcacggtgatgcagattcaccttaccgagcccaagggtgacattctg
ctgttcttgacaggtcaagaagaaatcgacacagcctgcgaggtcctatacgagagaatg
aaggcgttagggcctaacgtgcctgaactcatcattctccctgtttacgcgtcgcttccc
accgagatgcagagtcgaatcttcgagccagcgccccctggcagccgcaaggttgtcatc
gccaccaacattgctgagacttcgatcaccatcgatgagatctactacgtcgtggacccc
ggtttcgtgaagcagaatgcatacgatcctaagctgggaatggactctctggtggttacc
cctatttcgcaggctcaggcgaaccaaagatccggcagagctggccgaaccggtcccgga
aagtgtttccgattgtacacagaagctgcgtatcagtcagagatgttgccgactaccatc
cctgaaattcagcgacagaatttgtctacgacgattcttatgctcaaggccatgggcatc
aacgacctgctgcatttcgactttatggacccccctccgatcaacaccatgcttaccgcg
ttggaggagctgtatgcgcttagcgccctggacgatgaaggcctcctgactcggctgggc
agaaagatggccgacttccccatggagccctcccttgccaaggtcctcatcgctgccgtt
gagctcgagtgcgccgaagaagtgctcagcattgtttccatgctcaacatctcgaccgtg
ttttatcgtcccaaggagaagcagtcacaagccgatcagaagaaggcaaagttccacgac
cctcatggcgaccacctcaccctgctcaacgtgtacaattcatggaagcacagcggatac
tcagccccctggtgctttgagaactttatccaggcgcgttccatgcgtcgtgcaaaggat
gttcgtgaccaaatcgttaagatcatggatcggtacaaacatcctatcgcctcgtgcgga
cgcgcaaccgaaaaggttcgccgtgctctctgcgcaggcttcttccgcaacgcggcgcga
aaggacccgcaggagggatacaagacgctgacagagggtacacctgtatacctgcatcca
agctcagccctgtttggcaagcaggctgagtgggtgatttaccatgagcttgtgttgacg
accaaggagtacatgcactgcacgacaagcatcgagccaaagtggctcgtggaggctgcg
ccgaccttcttcaaggttgcaccaacggatcgactgagcaagaggaagaaggcagagagg
atccagccactgtacaacaagtttgcaaacgaggatgattggcgtttgagtgcacagagg
aagggaggtagaggcggtggtggcggcggaacatggggataa
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