Fulvia fulva: CLAFUR5_06361
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Entry
CLAFUR5_06361 CDS
T08195
Name
(RefSeq) Polyadenylation factor subunit 2
KO
K15542
polyadenylation factor subunit 2
Organism
ffu
Fulvia fulva
Pathway
ffu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLAFUR5_06361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_06361
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
CLAFUR5_06361
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
MIOS_WD40
Frtz
Motif
Other DBs
NCBI-GeneID:
71986239
NCBI-ProteinID:
XP_047762619
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Position
5:complement(join(4567861..4569566,4569785..4569863))
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AA seq
594 aa
AA seq
DB search
MERDFHGGHGGYERDGNSRPRGRPNRRNATDIGTTYVNFLGNRRAPGRGTRGFEAERPVA
SYIANMLPPIARKARPADSIPAKHLHTAFNKVRHHVTAVKWTPEGRRLLTGSTSGEFTLW
NGTGFNFETIMQAHDNAIQCVEYSHNDEFLISGDVDGIVKYWQTNFNNIQEIHAHQDKIR
DMSFAPTDTKFATASDDQTVKIFDFNTGVEQTTLTGHGWDVKSVDWHPTKGLLVSSGKDH
QVKLWDPRNGRALTSLMGHKNTVHMVRWEPSNGVLLASCARDSVRVFDIRMMRDVFLLKG
HEKDVNSLVWHPFHSSLLTTGGSSGGMHHYLLDEQNNAQHGAPSTLSPYDSKNPTEAPAQ
SIWPAHVLQAAHDWSIWSMDWHPMGHILASGSNDKATRFWTRPRPGEDSYMKDKYHIGQD
EAEKQGTFNKKTACEEEEAEEDDDEDAIDDQTQQSSLPGLISRSKLPGLGAAAVPAFAPP
FPGHGPQPVQAPSFMPPAAPSPEELAALYQRFGGQLPPPGQFPPPLASFQPQGMPLGFAP
PQGYPPSFGDGLPGMGQPPAPPSRDGGVRKRGPLPDQAEALKQEMRAGRYTKAR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgactttcatggcggtcatggcggctatgagcgcgacggaaactcgcgacca
cgtggaagaccgaaccgacgcaatgcgacagacattggaaccacatatgtcaactttctc
gggaatcgacgggcccctggacgaggcacacgaggctttgaggcagagagaccggtggca
agctatatcgccaacatgcttcccccgatcgctcgcaaggccagacccgcagactcaatc
ccagcaaagcatcttcacacggcgttcaacaaggtcagacatcatgtcacggccgtcaag
tggactccggaaggtcgtcgtcttttgactggctcgacaagtggcgagttcacactatgg
aacggcacgggattcaacttcgagaccatcatgcaggcgcacgataatgcaattcagtgt
gtcgagtactcgcataatgacgagttcctcatctccggtgatgtcgatggtatcgtcaag
tattggcagaccaacttcaacaatatccaagagatccacgcccaccaggacaagatcagg
gatatgtcattcgcgcccactgacaccaaatttgccacggcgtcagacgaccaaactgtc
aagatctttgacttcaacacaggtgttgaacagactacgttgaccggacacggctgggac
gtgaagagtgtcgactggcaccccacaaaaggtctccttgtgagtagtggaaaggaccac
caagtcaagctatgggacccccgcaacggacgcgcactcacatcattaatgggccacaaa
aatacagtccatatggtgcggtgggagcccagtaacggcgtcttgcttgcatcttgtgct
cgagattcggtccgcgtgttcgatattcgcatgatgcgagacgtctttctcctcaaaggc
catgaaaaggatgtcaattccctcgtatggcatccctttcactcttcactcctcaccact
ggcggcagctccggcggaatgcaccactaccttctcgacgagcaaaacaacgcccaacac
ggggcaccatccaccctctcaccctacgactccaagaaccccacagaagcacccgcacaa
tccatctggcccgcccacgtactccaagcagcccatgattggagcatctggagcatggac
tggcatcccatgggccacatcctcgcatctggctccaacgacaaagcaacccgcttctgg
acccgcccacgaccaggcgaagacagctacatgaaagacaaataccacatcggccaggat
gaggccgagaagcaaggcaccttcaacaagaagacagcctgcgaggaggaagaagcggaa
gaagacgatgacgaagacgccatcgacgatcaaacccagcagtcctccctccctggcctg
atttccagatccaaactcccaggtctcggcgctgcagcagttccagctttcgctccaccc
ttcccgggacatggcccacaacctgtgcaagcaccatcctttatgccacctgcagctccc
tcacccgaggaactcgctgctctgtaccagcgatttggaggccagctgccgcctccaggt
cagttcccaccaccactagccagctttcaaccacaaggtatgccactaggattcgcgcca
ccacaaggctatccaccttcgtttggcgacgggctgcctgggatgggtcagcctcctgcg
ccgccttcaagggatggcggtgtccgtaagcgaggtccgctacccgaccaggctgaagcg
ctcaagcaggagatgcgggcgggacgatatactaaggcgagataa
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