Fulvia fulva: CLAFUR5_11232
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Entry
CLAFUR5_11232 CDS
T08195
Name
(RefSeq) Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ffu
Fulvia fulva
Pathway
ffu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CLAFUR5_11232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ffu03041
]
CLAFUR5_11232
Enzymes [BR:
ffu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CLAFUR5_11232
Spliceosome [BR:
ffu03041
]
Complex C
Other components
Step II factors
CLAFUR5_11232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
S1
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
T2SSE
AAA_19
PhoH
AAA_30
nSTAND3
Motif
Other DBs
NCBI-GeneID:
71991110
NCBI-ProteinID:
XP_047765630
LinkDB
All DBs
Position
8:complement(2357289..2360882)
Genome browser
AA seq
1197 aa
AA seq
DB search
MHDLEQLELLSLVSKITSEISQHMGMSDKTIAEFIIAEHENCASVDDFAKKLGDFDFSPS
LAENIDRLIRTMHPKYKGRGGGKDIMDELEALAPKDSKKDKFRGLAIPDKEIEEDALDDT
FALLEGMAGGPKKETNGRKRIIDAERPVESEAPRKRTRRSRSRSRSPKRNDDYVFEDEFG
RTRTHRPSERKRREDRDRSPRREERSHKRKRRRDSFDRKPEPELDDEPVLHKVYDGWVTG
VKDFGVFVQLRGVKGKQDGLVHVSAMAHHKVNHPSDLVSRGQEVKVKIMKVQDKRISLSM
SEVDQVSGQDLNAGRGLAGTGANAMALNGNGLEAELKTVVPVIEGKGTGRKHRKRMTSPE
RWEIRQLIASGVIKAADFPDLDEDYNATINGEQIEEEENVDIEVKDDEPPFLAGQTKQSL
ELSPIRVIKAPDGSMNRAAMQGDVLAKERRDLKQQEAQDKAKQEAAKTDLNQEWNDPMVN
PSERRFASDLRQPKQGSGASQEVPEWKKIATNKAATGKRTDMSIKEQRESLPAYKMRKQF
LDAVRQYQLMIVVGDTGSGKTTQLTQYLAEDGFGNNGMIGCTQPRRVAAMSVAARVSDEV
GCRLGEEVGYTIRFEDKTSENTKIKYMTDGIMQREILLDPELNKYSVIMLDEAHERTIAT
DVLFGLLKKTLKRRPDMKLIVTSATLDAEKFSTYFNECPILTIPGRTFPVEIMYSREPES
DYLDAALTTVMQIHLTEKPGDILLFLTGKEEIDTSCEILYERMKALGPSVPELMILPIYG
ALPSEIASRIFEPAPDGMRKVVIATNIAETSITIDGIYFVVDPGFVKQTAYDAKLGMDRL
QVTPISQAQAKQRAGRAGRTGPGKCFRLYTETAFQSEMLPTTIPEIQRQNLSNTILMLKA
MGINDLLGFDFMDPPPTNTMLTALEELYALGALDDEGLLTRLGRRMADFPMDPTLGKSLI
MSVELGCSEEMLSIVAMISAVQTVFHRPKEKQQQADQKKARFHDPAGDHLTLLNVYQGWK
NAGRNDAWCFENFIQPRSIKRAEDVRKQLVQILERHRLTIVSCGRDTTRVRQALCSGFFR
NSARKDPQEGYKTLVEQTPVYMHPASALFGKAAEHVIYHSLVETTREYMHNVTAIEPKWL
VEAAPTFFKVAGKDGMGMSRRQKAERIQPLHNRFANEDDWRLSAQKRQGRAGGGTWG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacctagaacagctcgagctgctctcgctggtgagcaaaatcaccagcgaaatc
agccagcacatgggcatgagcgacaaaaccatcgccgagttcatcatcgccgagcacgag
aattgcgccagcgtcgatgacttcgcgaagaagctgggggactttgatttctcaccatct
ctggccgagaacatcgatcgcctcatccggactatgcatccgaagtacaagggacgtggt
ggaggcaaggacatcatggacgagctggaagcgcttgcgccgaaggacagtaagaaggac
aagttccgtggtctcgcgattccggacaaggagatcgaagaggatgcgctggatgatacg
tttgcgctgctggagggcatggctggtgggcccaagaaggaaacgaatgggcgcaagagg
atcattgatgcggaacggcctgtggagagcgaggcgcctaggaaacgcacgagacgatca
cgatcgagatcgaggagtcccaaaaggaacgacgactacgtctttgaggacgaatttgga
cgaacgcgaacgcatcgaccttcagaacgcaagaggagggaggatcgagacaggtccccg
cgccgagaggagagatcacataagaggaagcgtcggagggactcgtttgatcgaaaaccc
gaacccgagctggacgacgagcctgtactgcacaaagtctacgatggctgggtcactggc
gtgaaagactttggagtgtttgtgcagcttcggggtgtgaaggggaagcaggatggcttg
gtccatgtctctgcgatggcgcatcacaaagtcaatcatccgagtgatcttgtcagtaga
gggcaagaagtgaaggtgaagattatgaaagtgcaggacaagcgcataagtctgagcatg
tcagaagtggatcaggtctccgggcaggatctcaatgctgggcgcggattagcagggacg
ggggcgaatgctatggctctgaatggcaacggtctagaagctgagctgaagactgttgtg
cctgtaatagagggcaaggggactggcaggaaacaccggaaacgcatgaccagtccggaa
aggtgggagattcggcagttgatagcatccggtgtgatcaaggccgccgacttccccgac
ctggacgaggactacaacgccacgatcaatggcgagcagatcgaggaagaggagaacgtg
gatatcgaggtcaaagacgacgagccgccattcttggctggtcagacgaagcagtcccta
gaactctcgccgatacgtgtcatcaaggctcctgatggcagcatgaaccgagcagcgatg
cagggtgacgtgcttgcgaaggaacgaagagatctgaagcaacaggaggcacaggacaaa
gctaagcaggaggctgcgaagacagatctgaatcaggaatggaacgaccccatggtgaac
ccaagtgaacgaagattcgcgagtgacttgaggcaaccgaagcagggcagtggtgcctcg
caagaagtgccagagtggaagaaaatcgccacgaacaaggccgccactggcaagaggacc
gacatgtcgatcaaggagcagcgagagagtttgcctgcgtacaagatgcgaaagcagttc
ttagacgctgtcaggcaataccagctcatgattgtggtcggcgatactggttcgggtaaa
acgacacagcttacgcaatacttggctgaagacggattcgggaacaatggcatgattggc
tgcactcaacctcgtcgagtagcagccatgtcagtcgcagctcgtgtgagcgatgaagtc
ggctgcagactaggcgaagaagtgggatacacgattcgattcgaggacaagacgtctgag
aacaccaagatcaagtacatgacagacggtatcatgcagcgtgagatcctgcttgatccg
gagctcaacaagtacagtgtcatcatgctggacgaagctcacgagcgtacgatcgctacc
gatgtgctttttggtctgcttaagaagaccttaaagaggcgaccggacatgaagctaatc
gttacttctgcgactttggatgctgagaagttctcgacatacttcaacgagtgtccaatc
ttgacaattccgggccgcaccttccctgtcgaaatcatgtacagcagggagccagaaagc
gattacctcgacgccgcacttactactgtcatgcagatacacctcacggagaagcctgga
gacatcctgctcttcttgacaggaaaagaagagattgacaccagctgtgagatactgtac
gagcgcatgaaagcgctaggtccatctgttcctgagctgatgatattgcccatctatggt
gcacttccatctgagattgcaagtcgcatcttcgagccggcgccggatggaatgaggaag
gtagtcatcgctaccaacattgccgagacaagtatcacgattgacggaatttacttcgtg
gtcgatccgggcttcgtgaagcaaactgcatacgacgctaagcttggcatggaccgattg
caagtcacacccatttcccaggcgcaagccaagcaacgtgcaggacgtgctggcagaaca
ggtcctggcaaatgcttcaggctgtatactgagaccgcatttcagagtgagatgttgcct
acgacaataccagagatccaaaggcaaaatttgtccaacacaattctgatgctgaaagcc
atgggcatcaacgatcttcttggcttcgacttcatggacccgcctcccacaaacactatg
cttacagccctggaagaactctatgcattaggcgctctcgacgacgaaggccttctaaca
cgtctcgggcgccgcatggccgacttccccatggatcccaccctcggcaagtccctcatc
atgtccgtcgaactcggctgcagcgaagaaatgctgtccatcgtcgccatgatctccgcc
gtgcaaaccgtcttccaccggcccaaagaaaagcaacaacaagccgaccagaaaaaagcg
cgcttccacgaccccgccggtgaccacctcaccctactcaacgtctaccaaggctggaag
aacgcaggtcgcaacgacgcctggtgtttcgaaaacttcatccaaccccgcagcatcaaa
cgcgccgaagacgtccgcaaacaactcgtccaaatcctcgaacggcaccgcctcaccatc
gtctcctgcggtcgtgacaccacacgtgtacgacaggccctctgctccggcttcttccgc
aactccgctcgcaaagatccgcaagagggatacaagactctcgtcgagcaaactccagta
tacatgcaccctgcatcagcactcttcggaaaagccgccgagcatgttatatatcatagc
ttggtggagacgacgagggagtatatgcataacgttacggcgattgagcccaagtggctg
gtcgaggcggcgccgacgttcttcaaggttgcgggtaaggatgggatgggcatgagtcga
cggcagaaggcagagaggattcagccgttgcataataggtttgctaatgaggatgattgg
aggttgagtgcgcagaagaggcaggggagggcgggtggtggaacttggggttag
DBGET
integrated database retrieval system
