KEGG   Fusarium graminearum: FGSG_05320
Entry
FGSG_05320        CDS       T01038                                 
Name
(RefSeq) hypothetical protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
fgr  Fusarium graminearum
Pathway
fgr03018  RNA degradation
fgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FGSG_05320
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FGSG_05320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fgr03019]
    FGSG_05320
   03041 Spliceosome [BR:fgr03041]
    FGSG_05320
Messenger RNA biogenesis [BR:fgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FGSG_05320
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FGSG_05320
Spliceosome [BR:fgr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FGSG_05320
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 23552506
NCBI-ProteinID: XP_011323835
UniProt: I1RMW7
LinkDB
Position
3:1858936..1859874
AA seq 124 aa
MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFVRLPEVY
VKGNNIKYLRVPDEIIDQVSESQKGQQGGFRGGRGGGSRGDHSGRGGDRGRGRGGRGRGR
GRGQ
NT seq 375 nt   +upstreamnt  +downstreamnt
atgctacccctcggtctacttaacgccgcccaaggccaccccatgctggtcgagctgaag
aacggagagacactcaacggtcacctggtttcttgcgatacatggatgaacctcacactc
aaggaggtggtgcagacaagtccggagggtgatagattcgtgcgattaccggaggtctat
gtcaagggaaacaacatcaaatacctgagagtaccagacgagatcatcgaccaggttagc
gaatcgcagaagggccagcagggcggtttccgaggcggacgaggaggcggttcaagagga
gaccacagtggacgcggcggtgaccgtggtcgtggccgtggaggccgaggtcgtggccgg
ggacgaggtcaataa

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