Fusarium graminearum: FGSG_05320
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Entry
FGSG_05320 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_05320
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_05320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_05320
03041 Spliceosome [BR:
fgr03041
]
FGSG_05320
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FGSG_05320
mRNA degradation factors
5'-3' decay
Lsm complex
FGSG_05320
Spliceosome [BR:
fgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FGSG_05320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
23552506
NCBI-ProteinID:
XP_011323835
UniProt:
I1RMW7
LinkDB
All DBs
Position
3:1858936..1859874
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AA seq
124 aa
AA seq
DB search
MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDRFVRLPEVY
VKGNNIKYLRVPDEIIDQVSESQKGQQGGFRGGRGGGSRGDHSGRGGDRGRGRGGRGRGR
GRGQ
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgctacccctcggtctacttaacgccgcccaaggccaccccatgctggtcgagctgaag
aacggagagacactcaacggtcacctggtttcttgcgatacatggatgaacctcacactc
aaggaggtggtgcagacaagtccggagggtgatagattcgtgcgattaccggaggtctat
gtcaagggaaacaacatcaaatacctgagagtaccagacgagatcatcgaccaggttagc
gaatcgcagaagggccagcagggcggtttccgaggcggacgaggaggcggttcaagagga
gaccacagtggacgcggcggtgaccgtggtcgtggccgtggaggccgaggtcgtggccgg
ggacgaggtcaataa
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