Fusarium graminearum: FGSG_07009
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Entry
FGSG_07009 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
fgr
Fusarium graminearum
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_07009
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
FGSG_07009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
DUF4355
Rrp44_CSD1
Motif
Other DBs
NCBI-GeneID:
23554108
NCBI-ProteinID:
XP_011326696
LinkDB
All DBs
Position
4:2016359..2020153
Genome browser
AA seq
1246 aa
AA seq
DB search
MPNMSQAAFQFPNQVPQQNIAPPTQPLSHRRNQSALPNMGMGPPPAPSSGASGNAPFGSF
EAPQAQAQGRENAGGRGGRGGPPGGGHQRRHSLALADAKKAAELAQQKRTTTGFSFPASP
APDDENKPAAQPTLDVPVAQGSTRGGRGGHGRSQSMAVNGRGGGRGGGLNAESNEFQRRG
SGHARTGSRNFEGNWRTQAQDQGGNAGQNQGFQPGHRPRGSMNQSVSGVGGFQYNPNQPQ
VMQMPNQMMMPQMYGQQLNPMQLNQLQALQAAQMNGQQFVGLQGSQHAGQLGGQQQQQQR
KTLFTPYLPQASLPALLGDGQLVSGILRVNKKNRSDAYVTTQDGLLDADIFICGSKDRNR
ALEGDLVAVELLDVDEVWGQKREKEEKKKRKDITDTRSGSTNQGNQNSSNNNDGNPPEGG
IRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEEEINDEQKPLYAGHVVAVVERVAGQMFSG
TLGLLRPSSQATKEKQEAERAAREGNNSRHPEPRQQEKPKIVWFKPTDKRVPLIAIPTEQ
APRDFVEKHQDYADRIFVACIKRWPITSLHPFGTLVEQLGRMGDLKVETDALLRDNNFAS
DEFSDAVLRSVGLQDWSLEKEDEAAVAERRDYREEKAFTIDFNGGAELGNAVHAKSRPDG
KIEIGVHVPDIAHFVKPNSLVDREAKKRGTSVQLKNRFCALLPPKLSTEICSLTPDQDRL
AVSVVFNVNPLTGSVSEGDAWVGRSIVKSAGKVSLDDINDALNNPSEYKNQAVPVNTIQI
LNAVSQKFREARLGAGGEPIAPLRLFQQLDDENDPVQDNLFDSTQALELVEELLHKANAH
VAQRLVEGLPEKAFLRRHSAPNPRRLQTFVERMTALGYDIDSSGSGALQNSLFKVDDPDL
RKGMETLVVKSMQRAKYFVSGKTNKQLWPHYALNLPVYTHFTNPTRRYADIIVHRQLEAV
LSEGKIEFTDDLENLVKTAESCNTKKDSAQNAQEQSVHIESCRTMDKKRQEANGDLIAEG
IVLCVYESAFDVLIPEWGFEKRVHCDQLPLKKAEFRKEKRVLELYWEKGVPSSAFVPEDE
RPKAAASIRHSNAIAAQRQAEEAERARKEREEATRKQTDTGTISTDDVDALFDDDDDNTS
DVTEAMAGASLAERPTQSVPGSPTRSTSTAGNLHRTRSDSKVPVAEAVETRLSNKEKYLN
LFSLREEGGDYIQDVTEMTRVPVILKTDLTKSPPCLTIRSLNPYAL
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatatgtcgcaagctgctttccaattccccaaccaagtacctcagcaaaacatt
gccccccctacccagccactttcacatcgccgtaatcagtcggcactccccaacatgggt
atgggacctcctcccgcaccttcatccggtgcttctggaaacgctcccttcggaagcttt
gaggccccccaggcccaagcccaaggccgagagaacgctggaggccgaggcggtcgtggt
gggccccctggcggaggtcatcagagaagacactctctggctcttgccgacgccaagaag
gccgccgaactcgcccagcagaagcgaacaactacaggcttctcattccctgcctctccc
gcccccgatgatgagaacaagcccgctgctcagcctaccctcgatgttcccgtcgctcaa
ggatcgactcgtggagggcgtggaggtcatggccgcagccagagtatggctgtcaatggc
cgtggaggcggtcgtggcggcggcttgaacgctgagagcaacgagttccagcgtcgcgga
agcggccacgctcgtaccggatcccgcaacttcgaaggaaactggcgcacccaagctcaa
gatcaaggcggcaacgctggtcagaaccaaggcttccagcctggtcaccgacctcgtgga
tccatgaaccagtccgtctctggagttggaggcttccagtacaaccctaaccaacctcag
gttatgcagatgccaaaccaaatgatgatgccccagatgtatggtcagcagcttaaccct
atgcaactgaaccagttgcaggcattgcaagccgctcagatgaacggtcagcaattcgtg
ggccttcagggctcacagcacgctggtcagctcggtggccagcagcagcaacagcagcgc
aagacccttttcaccccttatcttccccaggcctctcttcctgctctcttgggtgatggt
caactcgtttctggtatcctccgtgttaacaagaagaaccgtagcgatgcttacgttacc
actcaggatggcctccttgacgccgatatctttatttgcggtagcaaggaccgaaaccgt
gcgcttgagggtgatctcgttgctgttgagctcctagacgtcgatgaagtctggggccag
aagcgcgagaaagaagaaaagaagaagcgcaaggacattaccgatactcgatccggatcc
accaatcagggtaaccagaactctagtaacaacaatgacggaaacccccctgagggcggt
attcgccgccgtggcagtctgcgtcagcgacccacacaaaagaagaacgacgatgtcgaa
gtcgagggtcagagccttctccttgtcgaggaggaggagattaacgacgagcagaagcct
ctgtacgctggtcatgtcgttgcagttgtggagcgagttgctggtcaaatgttctctgga
actcttggtctgctccgccccagcagtcaagccaccaaggagaagcaggaggctgagagg
gccgctcgcgagggtaacaactcccgtcaccctgagcctcgtcagcaggaaaagccaaag
attgtttggttcaagcctacagacaagcgtgtccctcttatcgccatccccactgagcag
gctccccgcgatttcgtcgagaagcaccaagactatgcggatcgaatttttgtggcctgc
ataaagcgctggcccattacttcgctccaccccttcggaactctcgtcgaacagcttgga
cgcatgggtgatctcaaggttgagactgatgctctccttcgcgataacaactttgcttca
gatgagttctctgatgctgttctccgcagcgtcggtctccaagattggtctctcgagaag
gaggacgaggctgctgtagccgagcgccgcgactaccgtgaagagaaggctttcacaatt
gacttcaacgggggcgccgagcttggcaatgcagtccacgccaagtcccgccctgatggc
aagattgagattggtgtccatgttcctgacattgctcactttgtcaagcccaactccctt
gtggatcgtgaggcgaagaagagaggcacatccgttcagctcaagaaccgcttctgcgct
ttgctgcctcccaagctgtccaccgaaatctgctctctgacccctgaccaggatcgtcta
gctgtttctgttgttttcaacgtgaaccccctcaccggatctgtctccgaaggtgacgca
tgggttggccgttcaattgtcaagagtgccggcaaggtctctcttgatgacatcaatgat
gctcttaacaacccttctgagtacaagaaccaagctgttcccgtcaacactattcaaatc
ctcaacgctgtttcacagaagttccgggaagctcgtctgggcgcaggcggcgagccaatt
gcccctcttaggttgttccaacagctcgacgacgaaaacgaccctgtccaagataacctc
tttgactcaactcaggctctcgagcttgttgaagagttgcttcacaaggccaatgctcat
gtcgcacagcgccttgttgagggacttcccgagaaggctttcctgcgacgccattctgct
cccaaccctcgtcgactccaaacctttgtggagcgcatgacagctctgggctatgacatc
gactcatctggcagtggtgctcttcaaaacagtcttttcaaggtcgatgaccccgatctg
cgcaagggcatggagacacttgtcgttaagtctatgcagagggcgaagtacttcgtctca
ggaaagaccaacaagcaattgtggcctcactatgctctcaacctgcccgtctacacccac
ttcaccaaccccactcgccgatacgccgacataattgtgcatcgccaattggaggctgtt
ctctccgagggcaagattgagttcactgatgatctggagaatcttgtcaagactgccgag
tcctgcaacaccaagaaggactccgctcaaaatgctcaggagcagagtgttcacatcgag
tcttgccgaacaatggacaaaaagcgacaggaagccaacggtgatctcatcgctgagggt
attgtcctgtgcgtttacgaatcagcctttgatgtcctcattcctgagtggggcttcgag
aagcgagttcactgcgatcagctgcccttgaagaaggccgagttccgcaaggagaagcgc
gtcctcgagctttactgggaaaagggtgtccccagctctgcgttcgtgcccgaggatgag
cgacccaaggctgcggcatccattcgacactcgaacgctattgctgctcagcgacaggct
gaggaggctgaacgtgcccgaaaggagcgcgaggaggctacccgtaagcaaaccgacaca
ggtaccatctctactgatgatgttgatgccctgttcgacgacgacgatgacaacacatcg
gatgtcaccgaggctatggccggagcttcactggctgaacgcccaacacagagcgttcct
ggttccccaactcgatccacttccactgctggtaacctgcaccgcacccgctctgactcc
aaggtacccgtggcagaggctgttgagactcgcctctcaaacaaggagaagtaccttaac
ctgttctcgctccgtgaagagggaggtgattacatccaggatgtgacagagatgacgaga
gtgccggtcattctgaagacggatcttaccaagagcccaccttgcctcacaattcgatcc
ctaaacccctacgctctgtaa
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integrated database retrieval system
