Fusarium graminearum: FGSG_07524
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Entry
FGSG_07524 CDS
T01038
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
fgr
Fusarium graminearum
Pathway
fgr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FGSG_07524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fgr03021
]
FGSG_07524
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_07524
Transcription machinery [BR:
fgr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
FGSG_07524
RNA polymerase I system
FGSG_07524
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
FGSG_07524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5_N
CTD
Spt5-NGN
KOW
Cornifin
DUF3912
GARS_C
Motif
Other DBs
NCBI-GeneID:
23554596
NCBI-ProteinID:
XP_011327300
UniProt:
Q4I5I4
A0A1I9FH61
LinkDB
All DBs
Position
4:complement(3763017..3766353)
Genome browser
AA seq
1042 aa
AA seq
DB search
MSSHDPSRFDDSEDEEDFNPAPADLSDEEQDDDHQKVKRGSSPAPRDDDDDEDERPSKSR
HADDDEEEEEEEEEEEDTGRRRDDDDDEDEEEEDEEDEDIQQGHRRKRRKERGANFFDIE
AEVDDEDEGEDDEMLGEEIGDFITNDHPDDIAETGDDDRRHRELDRRRDMDSSMDAEKQA
EILRQRYGNRRSGKGFRDVSVVPKRLLLPSVDDPSIWAVRCKEGKEREVVFSIMKRIEER
AGTKDELAITAAFERGGIESVMKGFVYVEARRQTDILKGLDSMMNVYPHSKMILVDIKDM
PELFRISKTPTLEPGAWVRLRRPPKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRDDAL
SADGKRKRPFGNGPKPPQRLFSEIEARKRNPRAIQGNPSTGTWTYNNEEFENGFQVRDVK
IQQLTVTDVNPSLEEVTRFASGAEDGTENLDLKALAHSLKDSNALATYLPGDVVEVYTGE
QKGVVGKAMRVHSDVVSITVTEGELVGQEIDVPIRALRKRFNVGDHVKVIGGSKFRDEVG
MVVNIRDDKVTILTDQTNTEITVFSKDLREASDIGGQGSLGQYSLHDLVQLDPTTVGCVV
KVDRESLVALDQFGTPRQVMPSQISNKIPKRKTAVAVDRHGSEIRLEDVVKEYTGQQRQG
KIIHIHRSYIFLHSNDNKEHAGVFVTKANMVNTVAAKGGRVNTAAATGPDLTAMNPALKL
HKNGSENKPVPPPRSFGKDKAIEQTVVIKKGAYKGLLGIVKDTTDTHARVELHTKSKTIT
VPKDCLAFKNRMTGATIDIASRGGRGGYGGGAGRGGGGDRVPGWQSGSRTPMAGGNSDRV
PAWGSRTPAASGRTPAWKAQDMSGARTPAWADGSRTVNPYDGSRTAYGSGGRTPAWQAGG
RTPAPGDAFGAGSRTPAYGGGDSWGSGSKTPAWGVTAPTPGASGGDAWGPGSYDAPTPGG
ALGAPTPGAMNAPTPGAYSAPTPAAISAPTPGGWQGGWGADSAPTPAAGAPTPGYYGAPT
PGASYGPPETPAATGPRYTDDD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcacgacccttcgcgcttcgacgattctgaggatgaggaagatttcaaccct
gcgcctgccgatctatccgacgaagagcaagatgacgaccatcaaaaagtgaagcgtgga
agcagccctgcgcctcgcgacgatgatgatgacgaggatgagcgaccctcgaaatcgcga
cacgccgatgacgatgaggaagaagaagaggaagaagaggaagaggaagatactggcaga
cgtcgcgacgatgatgatgacgaagacgaagaagaagaggatgaggaagatgaggacatc
caacagggccatcgcagaaagcgcagaaaggagcgaggtgccaatttcttcgatatcgaa
gccgaagtcgacgatgaagacgaaggcgaagacgacgagatgctgggcgaagagatagga
gacttcattacaaacgaccaccccgacgatattgcggaaaccggtgacgatgacagacga
catcgcgaactcgatcgccgtagggacatggactctagcatggatgccgagaagcaagca
gagattctgcgacagcgatacggtaacagacgctctggcaaaggcttcagagatgtatcg
gtggttcccaagcgattgctgctccctagtgtggatgaccccagcatttgggctgtccga
tgtaaagaaggaaaggaacgagaggtcgttttctccatcatgaagcgcatcgaagagcga
gcgggtacaaaggacgaactcgccatcactgctgcgttcgaacgcggaggtatcgaatcc
gtcatgaagggatttgtctatgttgaagcccgacgccaaaccgacattctcaagggactt
gacagcatgatgaacgtgtatccccattccaagatgattcttgtcgatatcaaggatatg
cccgagctgtttcgcatctccaaaacccctactctggagcctggagcctgggtccgtctt
cgaaggcccccgaagcacaatggtgatcttgctcaagtcatcgatgtcactgagaacggc
ctggaagctcgagttcgcttcatcccccgattggattacggcatgcgagatgatgctttg
tctgctgatggcaagcgtaagcgaccctttggcaatggccctaagccaccgcagagactg
tttagcgagattgaggctcgaaagcgcaatcctcgcgctattcagggaaacccttccact
ggcacatggacatacaacaatgaggagttcgagaatggattccaagtcagggatgtcaaa
atccaacaacttaccgtcactgatgtgaacccatcccttgaagaggttaccagattcgct
tcaggggctgaggatggaaccgagaaccttgatctcaaggcgctggcacacagtctcaag
gacagtaacgctctcgctacatacctcccaggtgatgttgtcgaggtttacactggtgaa
cagaagggtgttgttggaaaggccatgcgtgttcactccgatgtcgtttccattaccgtc
actgaaggtgaactcgtcggacaggagatcgatgtccccatcagagctcttcgcaagcgc
ttcaatgttggtgatcacgtcaaggtcattggcggtagcaagtttagagatgaggtcgga
atggtcgtcaacatcagggatgacaaggttactatcttgacagatcagacaaacacagag
atcacagtcttcagcaaggatttgcgcgaggctagtgacattggtggccagggctcccta
ggccagtactcactacacgatcttgtgcagctcgaccctacgactgtgggttgtgttgtc
aaggttgatcgcgagtcacttgttgcccttgatcagttcggaacacctcgacaggttatg
ccatcgcagatttctaacaagattccaaagcgaaagacagccgttgccgttgatcgtcat
ggttctgagattcgcctagaagatgttgtcaaggagtataccggacagcagcgccagggc
aagatcatccacattcaccgttcgtacatcttcttacactccaacgacaacaaggagcat
gccggtgtttttgttacaaaggccaacatggtcaacactgttgctgccaagggtggccga
gtcaacactgcagccgccaccggtcctgatttgacggccatgaacccggcgctcaagctt
cacaagaacggaagtgagaacaagcccgttccaccacccagatcctttggcaaagataaa
gccattgaacagactgtcgttatcaagaagggagcctacaaaggtcttctgggtatcgtc
aaggacaccacagacacccatgctcgagtcgagcttcatacgaagagcaagaccatcacg
gtgcctaaggactgtctagccttcaagaacaggatgactggtgcaaccatcgatatcgcc
agccgaggcggtcgcggtggttatggtggcggtgctggacgtggtggcggcggcgatcgt
gtgccaggttggcagagcggttcacgcacacccatggcaggtggtaactctgatagggtg
cctgcttggggatcacgaacacctgctgcaagcggaagaacacctgcttggaaggcccag
gatatgtctggcgctcgtacccccgcatgggcagatggttcgcgaactgtcaacccctac
gacggcagccgtacggcttacgggtctggtggacgcacgccagcttggcaggctggcgga
agaacccctgctccaggtgatgcatttggtgctggatcacgtacaccggcttacggtgga
ggtgacagctggggctcaggatccaagacacctgcttggggagtcaccgcgccgactcca
ggagccagtggcggcgatgcatggggtccaggctcgtatgacgcccctactcccggcggt
gcactcggtgccccaactcctggtgccatgaacgctcctacacctggtgcttactcggca
cctacacccgctgctatcagcgcaccaacacctggtggctggcaaggcggatggggagca
gattcggcacctaccccggctgctggtgctcccacacctggttactacggtgctcctact
cctggagcaagttacggcccaccagagactcctgcagccactggtcctcgatacactgat
gacgactga
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integrated database retrieval system
