Fusarium graminearum: FGSG_10391
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Entry
FGSG_10391 CDS
T01038
Name
(RefSeq) hypothetical protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FGSG_10391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fgr03041
]
FGSG_10391
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FGSG_10391
Spliceosome [BR:
fgr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
FGSG_10391
Complex C
U4/U6.U5 tri-SnRNP related factors
FGSG_10391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
SRP54
T2SSE
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
23557300
NCBI-ProteinID:
XP_011319361
UniProt:
I1S0Z9
LinkDB
All DBs
Position
1:10702447..10705482
Genome browser
AA seq
1011 aa
AA seq
DB search
MSKKYAFLPMEEDEVGPQKVTKEKKSRHRHRERDRDDKSSSRPSKSRRERSRSKSPGRAS
SSRQSRPKQYRRRDDKAEFDDRWGDEEPPSDEPEEEDDEPEFEQSASKRVKLSHDESKDE
DLSDGAKEELDRKKDIEEREAFAKRLREKDSKKPKKDSRDVESSSRRKLAEDAEARNQAL
PDIRERSRQEYLKKREAERLALLRKQVAEETAELRSGVRLSEKEKAEFAKNREILRLAEE
RLKIDDHRDGYAMPEDYITEKGKLDRKKKEEALYKRYVEKDEFGQEKFVTEHEEWEREQA
SKAKAQIQRAERENDEYDYVMDDAQYIQWNLDSRLPGDDRKLTKEQQFLEAQIDAAEKKA
LSIQETRKSLPIYQYRDEFLAALEQYQVLVIVGETGSGKTTQLPQYLHEAGYTKNGLKVG
CTQPRRVAAMSVAARVAEEVGVKVGNEVGYTIRFEDCTSDKTVLKYMTDGMLLREFMTEP
DLAGYSALMIDEAHERTVHTDILLALIKDLSRERPDLKLLISSATMNAEKFAQYFDDAPI
FNIPGRRYPVDIYYTPAPEANYLAAAITTTFQIHTTQPKGDILIFLTGQDEIEAAELEIA
ETAKKLGSRVKELVICPIYANLPSELQSKIFEPTPDGARKVVLATNIAETSLTIDGIVYV
IDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKFAYMNEMDE
STTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQALNHKGELT
KLGRQMGEFPTDPMLAKAVLAADKEGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARN
RFTVKDGGDHITLLNVWNQWVDSDFSPVWAKENFLQQRSLTRARDVRDQLAKLCERVEVA
PSTCGATNLRPIKRAITAGFFPNAARLQKSGDSYRTVKNSTTVWIHPSSVLMAIDPPEKM
VVYFELVQTTKEYMRSVMPIEPRWLSELAPHFHKKKDVEEMEEKKMPKQRS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaagtacgctttccttcccatggaagaggatgaggtgggtcctcagaaagtt
accaaggagaagaaatctagacatcgacatcgcgaacgagaccgcgacgacaagtcatct
tcccgaccctcaaagtcccgtcgcgaacgcagtcgctcgaaatcaccaggtcgagcatct
tcatcacgccaaagccgacccaagcaatatcgacgacgcgacgacaaggccgaattcgat
gatcgatggggcgacgaggagccaccatccgatgaacctgaggaggaggatgatgagcca
gaatttgaacaatcagcaagcaagcgagttaaattaagccatgatgaatcaaaagatgaa
gacctatccgatggtgcgaaagaagaattggatcgcaaaaaggatattgaagagcgtgaa
gctttcgcaaagcgcctaagagaaaaggacagcaaaaagccgaaaaaggacagtagagat
gtagaatcatcgtcgagaagaaaacttgccgaagacgccgaagcgcggaaccaagcgtta
cccgacattcgagaacgatcgcgacaggaatatctcaagaaacgagaggccgaacgatta
gcccttctaaggaagcaggtcgcagaggaaactgctgagctacgaagcggcgtgcgactg
tcagaaaaagaaaaggccgagttcgccaagaacagggagatcttgcgactggctgaggag
cgcctcaagatcgatgaccacagagatggatatgctatgccagaggattacatcacagag
aagggtaaactcgaccgaaagaaaaaggaggaagcactttataagcgatacgtcgagaaa
gatgagtttggacaggagaaatttgttactgaacacgaggaatgggaacgggagcaagct
tcaaaggccaaggcgcagattcagcgcgccgagagagagaatgacgagtacgactatgtc
atggacgatgcccagtatattcagtggaacctggattcacgtttgcctggagatgatcgg
aaattaaccaaggaacaacaattccttgaggcgcaaatcgacgcagctgaaaagaaggcc
ctttcgattcaggagacaagaaaaagtctaccaatttaccaataccgagacgagttcctt
gctgcgctagagcagtaccaggttctagtcattgtcggagagactggtagtggaaagacg
actcaactaccgcaatatctccacgaagctggttataccaagaacggcctgaaggttgga
tgtactcagccccgacgagtggcagccatgagtgtagcagctcgtgtcgccgaagaagtt
ggtgtcaaggtcggaaacgaagttggatacactattcgttttgaggactgcacaagcgat
aaaactgttctgaagtacatgactgatggaatgttgctacgagaattcatgacggagccg
gatctggcagggtactcggcgctgatgattgacgaagcccacgaacgtacagtccatacc
gatattctgctggctttaatcaaggatctttcgagagaacgacctgatctgaagctgttg
atttcttcagctaccatgaacgctgaaaagtttgcgcagtactttgatgatgcgcccatc
tttaacattcccggtcgacgataccctgtggatatctattatacgcctgctcccgaggca
aactatttggctgcagctattacaacgactttccagatccacaccacccagcccaagggt
gacatcctgatcttcttgacgggtcaagatgagattgaagcagccgagcttgaaattgca
gaaacagcaaagaagctgggtagtcgtgtcaaagaacttgttatctgtcccatctatgcc
aacttgccctcggaactacagtccaagattttcgagcctacaccagatggcgctcgcaag
gttgtgctggctaccaacattgctgaaaccagtttgacaattgacggtattgtttatgtc
attgacccgggctatgtcaaggaaaacgtctacaacccggcgacaggcatgtccaacttg
gttgtcgttccttgttcaagagcttctgccaaccagcgaagtggtcgagctggtcgtgtc
ggaccaggaaagtgtttccgtctttataccaagtttgcatacatgaacgagatggacgag
tcgactacgccagaaatccaaagaacaaacctgaatggtgttgtgcttcagttgaagtct
cttggtattaatgagctgctcgattttgagttcatggaccctccacctacagaagctctt
atcggcgctctgaaccagctttttgctctgcaggcgttgaatcacaagggagagttgacc
aagcttggacgacagatgggtgaattccctacagatcctatgcttgccaaggctgtactc
gctgcggacaaggaaggatgtgttgaagaggtactgtctatcgtatctatgcttggtgaa
gcatctgccctcttcttccgacccaaggataagaagatccacgcagacagcgcccgcaac
cgattcacagtcaaggacggcggtgatcacatcacactactcaacgtgtggaaccaatgg
gtcgacagtgatttctcccccgtctgggccaaggagaactttctgcagcaacgctctctc
acgcgcgcacgcgacgtccgcgaccaactcgccaagctgtgcgagcgtgtcgaggtggca
ccgtccacatgcggcgccacgaacctgcgacccatcaagcgtgccatcacagctggcttc
ttccccaacgccgcgcggctgcagaagagcggcgacagctacaggacagtcaagaacagt
acgaccgtgtggatccatcccagcagcgtgctcatggctatcgatccgccagagaagatg
gtggtttactttgagctcgtgcagacgacaaaggagtatatgcgcagcgtcatgccgatt
gagcctagatggctgtcggagctggcgccgcatttccataaaaagaaggatgttgaggag
atggaggagaagaaaatgccaaaacagcgatcgtaa
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integrated database retrieval system
