Fusarium graminearum: FGSG_10791
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Entry
FGSG_10791 CDS
T01038
Name
(RefSeq) ATP-dependent RNA helicase DHH1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
fgr
Fusarium graminearum
Pathway
fgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGSG_10791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fgr03019
]
FGSG_10791
03036 Chromosome and associated proteins [BR:
fgr03036
]
FGSG_10791
Enzymes [BR:
fgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGSG_10791
Messenger RNA biogenesis [BR:
fgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
FGSG_10791
mRNA degradation factors
5'-3' decay
Decapping complex
FGSG_10791
Chromosome and associated proteins [BR:
fgr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
FGSG_10791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
23557675
NCBI-ProteinID:
XP_011325611
UniProt:
Q4HW67
A0A1I9FTE5
LinkDB
All DBs
Position
3:complement(6704530..6706207)
Genome browser
AA seq
486 aa
AA seq
DB search
MADQLADKLKSTQLSDEWKKNLNLPAKDNRQQTEDVTNTKGLEFENFALKRDLLMGIFEA
GFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTR
ELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILDLAGKNVA
DLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSATFPLSVKDFSDKNMVSP
YEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKIT
ELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNA
ETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPASIDKSLYVYENPE
SIPRPISNLPRGQLPAAQGQHQNPQHGNPHYNNGGRGRGGRGRGYRGRGGQGQGGRGRGP
PRDVQP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagctagcagacaagctgaaatccacccaactcagtgacgagtggaagaag
aaccttaacctccccgccaaagacaaccgacaacaaacagaggatgttacaaacacaaag
ggcctggagttcgaaaactttgccctcaagcgagacctgctcatgggtatctttgaagca
ggattcgaaaagccatcaccgattcaagaggaatctatccccgtcgcattaactggccga
gacattcttgcccgtgcaaagaacggcactggcaagacagccgcctttgtcatccccacc
ttggaacgcatcaaccccaagatttctaagatccaatgtcttattctcgtccccacacgt
gagcttgccatgcagacctcgcaagtctgcaaaactcttggtaagcacctcggtatcaat
gtcatggtcacgaccggtggtactggtcttcgagatgatattattcgccttcaggatccc
gttcatattgtggttggtaccccgggccgaattctcgatctcgctggcaagaatgttgcc
gaccttagcgaatgccccatgttcatcatggacgaggccgataagcttctgtccattgag
ttcacccctgtcattgagcagctcctgcagttccaccccaaggaccgacaggttatgctc
ttctccgccaccttccctctgtccgtgaaggacttctccgacaagaacatggtcagccca
tatgaaatcaacctaatggatgagctcacgctgaggggtattacccaatactacgccttc
gttgaagagaagcaaaaggttcattgcttgaacacgctcttttctaagcttcaaatcaac
caatccatcatcttttgtaattctacaaaccgagtcgaacttttggccaagaaaatcacc
gagcttggctactcttgtttctacagtcatgcgaagatgcagcaacatgcacgaaaccgt
gttttccacgatttccgtaacggtgtctgccgaaaccttgtgtgctccgatttgctcacc
cgtggtatcgacattcaggccgtcaacgttgtcatcaactttgatttccccaagaacgcc
gagacttacctccaccgtatcggtcgatccggccgttacggtcaccttggtctggctatt
aacctgatcaactgggacgatcgcttcaacctttacaacattgagcgagacctcggcacc
gaaattcagcctatccccgccagcatcgacaagagcctctatgtttacgagaaccccgag
tcaattcctcgacccatttcaaacctcccaaggggccaactacctgctgctcagggtcag
caccagaaccctcagcacggcaacccgcactataacaacggcggacgaggccgtggtgga
cgtggacgtggataccgtggccgcggtggccaaggccaaggtggtcgaggtcgcggccca
ccccgcgatgtccaaccctaa
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