Candidatus Filomicrobium marinum W: BN1229_v1_0127
Help
Entry
BN1229_v1_0127 CDS
T03856
Name
(GenBank) DNA ligase
Organism
fil
Candidatus Filomicrobium marinum W
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
CFW98624
UniProt:
A0A0D6J9X3
LinkDB
All DBs
Position
1:complement(124713..126329)
Genome browser
AA seq
538 aa
AA seq
DB search
MQRFANLVDSLAFTQSRNRKLSLLTDYFLTTSDPDRGWALAALTDGLPLRVPLRRILPEI
LADIVDPVLYHLSRDYVGDTAETVALLWPDRPEYQRDGARVTLDSVVTAFATAPNSSHAE
ILKGLLDALEPSSRFALLKLLGGAPRVGVSARLAKLALAQAFEQPVSEIEESWHAVDAPY
LALFDWLNGDGPRPDPGGRPVFRPMMLAHPIEDEDRTKLDPDDLLAEWKWDGIRVQVAAQ
MGEVRLFSRTGDDISAGFPDIVTAFTGRNCILDGELLVVREDEVAPFNDLQQRLNRKTVS
ARMVRDYPAHIRLYDSLQIDEKDLRDLPLIERRKRLEHWHRAHPPLSTDLSPLVPFNTFD
ELTHLWQNTRAEGIEGLMLKRKDSPYLSGRPRGHWWKWKRAPLTLDCVLMYAQRGSGKRS
SYYSDYTFGVWRDAPDDGAELVPVGKAYSGFTDAELLELDRFIRSNTTDRFGPVRAVSPK
LVLEVAFDALQKSTRHKSGIAMRFPRIARIRWDKPVSEADTLSRAQSLLKAPSLDKRG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttttgccaacctcgttgacagccttgccttcacgcaaagccgcaaccgcaaa
ctgtctctgctgacggattactttctgaccacctccgaccccgacagaggctgggcactc
gccgcactaacggatgggctccctctgcgggtcccactaaggcggatcctaccagaaatc
ctggccgatatagtcgatccggtcctgtatcacttgtcgcgggactacgttggcgacacg
gccgaaacggtcgcactgctatggccggatcggccggaataccaacgcgatggtgcgaga
gtaactcttgactccgttgtcactgcgttcgcgaccgcacccaactcgagccacgcagaa
atcctgaaagggctgcttgacgcgcttgaaccgtccagccgttttgcacttctcaaactc
ctcggtggcgccccgcgtgttggcgtatcagcgcgcttggcaaaactcgcattagcccaa
gccttcgagcagcccgtttctgaaatcgaggaatcctggcacgcagttgacgctccctac
ctcgcattgttcgactggctaaacggcgatggaccacgccccgacccgggcggacgtccc
gtcttccgcccgatgatgctcgcacacccgatcgaggatgaagaccgcacgaaacttgat
cccgacgatctgctcgcagaatggaagtgggatggaatccgcgttcaagtcgcagcccag
atgggagaggtccgtctcttctcccgaaccggcgatgacatctctgcaggctttcccgac
attgtgacagcctttactgggcgaaactgtattctggacggcgagctattggttgtccgc
gaggatgaagtcgcccccttcaacgatctccagcaacgcctcaatcgcaagacggtctca
gcgcgcatggtgcgcgactacccggcacacatccgcctgtacgattcactccaaatcgac
gaaaaagatctgcgcgacctgccgctcatcgaacgacgcaaacgtcttgagcactggcat
cgagcgcatccaccattgtcgacagacctgagcccgctcgtccccttcaacaccttcgat
gaactcacccacctctggcagaacacgcgcgccgaaggcatcgagggattgatgctgaag
cgcaaggacagcccctacctttccggacgcccccggggccattggtggaaatggaagcga
gcccccctcaccctcgattgtgtcctgatgtacgcgcagcgcggctccggcaaacggtca
tcgtactattccgattacacgttcggcgtctggcgggacgcccccgacgacggagcagaa
ctcgtccccgtgggaaaagcctactcgggtttcaccgacgcagagcttttggaactggat
cgcttcatcagatcgaacacgaccgaccgcttcggtcccgtgcgcgctgtctcccccaaa
cttgtgctcgaggttgctttcgacgcactgcagaaatcaacgcgacacaaatccggcatc
gcgatgcgctttccccgcatcgcgcgcatacgctgggacaagcccgtcagcgaagcggat
acgctgtcacgtgcgcaatcgcttctgaaagccccatcgctcgataaacgaggctag
DBGET
integrated database retrieval system
