Candidatus Filomicrobium marinum W: BN1229_v1_4066
Help
Entry
BN1229_v1_4066 CDS
T03856
Name
(GenBank) conserved protein of unknown function
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00470
D-Amino acid metabolism
fil00550
Peptidoglycan biosynthesis
fil01100
Metabolic pathways
fil01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN1229_v1_4066
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BN1229_v1_4066
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BN1229_v1_4066
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
BN1229_v1_4066
Enzymes [BR:
fil01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BN1229_v1_4066
Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
Precursor biosynthesis
Amino acid ligase
BN1229_v1_4066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_25
Dala_Dala_lig_C
Methyltransf_11
Methyltransf_31
Methyltransf_23
Ubie_methyltran
ATPgrasp_Ter
Methyltransf_12
MTS
TehB
ATP-grasp_3
ATP-grasp_4
Cons_hypoth95
FtsJ
MetW
Methyltransf_15
mRNA_G-N7_MeTrfase
Methyltransf_4
CMAS
GSP_synth
tRNA_U5-meth_tr
Motif
Other DBs
NCBI-ProteinID:
CFX64954
UniProt:
A0A0D6JKX1
LinkDB
All DBs
Position
1:3962661..3964703
Genome browser
AA seq
680 aa
AA seq
DB search
MEQLFSQIFQEVRQYTMAPTAKPKKVKRPTPRTSFGPVADLEQHLPSEWWRKLFNALYVK
TDGDVVENSENTSRDIDFLIAASGLEKAEDVLDLCCGQGRHSLELARRGYRKVTGVDRSR
YLIRLAKKRAQAEGLSVLFKEGDARNPRLPENSFDLVCIMGNSFGYFSNQTDDEKVLAAV
AKMLRPSGQIFLDITDGGYMAEHFERRSWEWIDAHQFVCRERSLSSDRDRLISREVIVHD
ELGVIADQFYAERLYTRESIAALLEKVGFRNFRDHGSAESVSDREQDLGMMARRILLTAD
APVKAARKAKGVTHRLDVTVLLGDPRLPDQVKRDGVFNAEDLDTVRRLKEGLSELPGYEF
RFLDNHKTLARDLSELSTDLVFNLCDEGFNNDPFKELHVPAMLEMLDLPYTGGAPAALAA
CYDKGLVRAAAMTLDVPVPLETYVRPGDQGATLPSVFPAILKPNVGDSSEGITKDAVVTD
ETALMDYLEKLRTSFPKRSVLVQEYLTGSEYSVGMIGNPGQGLRAFPILEVDYSRLDPSL
PKILGYESKWEPESPYWTQIRYVEANLNDLAQQQLIEHSSRLFERLGCRDYARFDFRADA
RGEIKLLEVNPNPGWCWDGKFNLMAGFAGVRYSEMLGQVLGAAVERLGIVERPVVRAAKS
SKTTNKTTQKKATQRAKQVA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaacagctttttagccaaatctttcaggaggttcggcagtatacgatggcgcctaca
gcgaaacccaaaaaggtaaaacggcccactccccgcaccagtttcggtccagtagcagat
ctcgaacagcacttgccgtccgagtggtggcgtaaactgttcaacgctttgtacgtgaag
acagacggggacgtcgtcgagaacagtgaaaacacatcgcgcgacatcgacttccttatt
gcggcgtccggcctagagaaagccgaggacgtgctcgacctttgctgcggccaaggtcga
catagccttgaactggcgcggcgcggatatcggaaggtcaccggtgttgatcgctcacgg
tatttgatccggcttgccaagaagcgtgcgcaggccgaggggctgagcgtgctgtttaag
gaaggcgatgcgcggaacccgcggttgccggagaacagttttgatctcgtctgcatcatg
ggtaactcgttcggctatttctcgaaccagaccgatgatgagaaagtgctcgctgccgtc
gccaaaatgctgcggccgtcggggcagatcttcctcgacatcaccgacggcgggtatatg
gcggagcacttcgagcgtcgctcctgggaatggattgatgcgcatcagttcgtgtgccgt
gagcgttctctctcctcagatcgggatcggctaatttctcgtgaggtgatcgtacacgac
gagcttggtgtcatcgcggatcagttctatgcggaacggctctacacccgcgagagcatc
gcggcgcttctcgagaaggtcggcttccgcaatttccgagatcacggctccgccgagagt
gtgtcggaccgggagcaggatttggggatgatggcgcggcgcattctgctgactgcggat
gcgccggttaaggctgcccgcaaggcaaaaggtgtgacgcaccgcctcgacgtgacggtg
ctcctcggcgatccccgcctgccggatcaagtcaagcgtgatggcgtcttcaacgccgaa
gatctggatacggtacggcgacttaaagaaggtctttctgaattgccgggatacgagttc
cgttttctcgacaaccataaaaccttggcgcgcgatctcagtgagctttcgaccgatctc
gtgttcaatctctgcgatgagggtttcaataacgaccccttcaaagagctacacgtgcca
gcaatgcttgagatgctggatttgccttacacgggcggtgcaccagctgcgttagcggct
tgctacgacaaggggctcgtacgcgcggcagcgatgacgctcgatgtgccggtgccgctt
gaaacgtatgtgcgtccaggggatcaaggcgcgacgctaccgtcggtttttcctgcgatt
ttgaagccgaacgtgggggatagttcggagggtattacaaaagatgccgtcgttaccgac
gaaacggcgcttatggattacctggaaaagctgcggacgtcgtttccgaagcgctccgtc
ctcgtgcaggagtatttgacgggatcggaatattctgtcggcatgatcggcaatccagga
caggggctcagagcgttcccgatcctggaagttgattactccaggctcgatccgtcattg
ccgaaaattctgggctacgaatcaaaatgggaaccagagagcccatattggacgcagatt
cgctatgtcgaagccaatctcaatgaccttgctcaacagcagctcattgagcactcctcg
cgtttgttcgagcggctaggctgccgagactatgcccggtttgattttcgggcggatgct
cgcggcgaaatcaagcttctggaagtgaaccccaaccccggctggtgctgggatggaaag
ttcaacttgatggcgggcttcgcgggcgttcgctacagcgaaatgctggggcaggtactt
ggcgcggctgttgaacggctcggtattgtcgagcgtccggttgtccgggctgccaagtcg
tccaagacgacgaataagacgacgcagaaaaaagcgacgcaacgagccaagcaagtagct
tga
DBGET
integrated database retrieval system
