Flavobacterium johnsoniae UW101: Fjoh_1318
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Entry
Fjoh_1318 CDS
T00508
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
fjo
Flavobacterium johnsoniae UW101
Pathway
fjo00300
Lysine biosynthesis
fjo00470
D-Amino acid metabolism
fjo00550
Peptidoglycan biosynthesis
fjo01100
Metabolic pathways
fjo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Fjoh_1318
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Fjoh_1318
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Fjoh_1318
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Fjoh_1318
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fjo01011
]
Fjoh_1318
Enzymes [BR:
fjo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Fjoh_1318
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Fjoh_1318
Peptidoglycan biosynthesis and degradation proteins [BR:
fjo01011
]
Precursor biosynthesis
Amino acid ligase
Fjoh_1318
Racemase
Fjoh_1318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ABQ04350
UniProt:
A5FKC2
LinkDB
All DBs
Position
1508552..1511020
Genome browser
AA seq
822 aa
AA seq
DB search
MSINLKSLIPVLNAEWTGSDTDIFVDHISIDSRSLQNGPQTLFIALSGANNDAHLYIAEL
IEKGVQNFAVQYIPENVKGKANFFVVKNTLKALQELAAYYRDLFDFPIIGLTGSNGKTIV
KEWLNFLLSPDYNIIRSPKSYNSQVGVPLSVIAINEKHNLGIFEAGISTVNEMVNLEKII
KPNIGVLTNIGSAHDEGFENLTQKINEKLLLFKKSAVIIYQKNELVDKCLLDFSAQYPLE
NRALFSWSFADASADVFILKKETKNDSTTIKYQYKDEIFNLEIPFSDSASIENAISCLLV
LLHFEYDFTIIQNRMEMLYPVEMRLEVKNGIHNCSLIDDSYSSDFQSLKIALDFLESQKK
NASKAVILSDIFQSGFSNEELYSKVAQLISDNKINRVIGIGTTISSFQDKFPNSTMFQNT
AAFIAEIENLNFNNETILIKGARSFQFEEIVSLLEEKTHETVLEINLDAINHNLNYFKSK
LADDVKIMVMVKAFGYGNGGLEIAKLLEHNKVNYLGVAFADEGISLKNGGIKLPIMVLNP
ESTSFPSIIQYKLEPEIYSIKGLNAFLKIAREKNLKDFPIHIKVDTGMHRLGFEDNTIDE
LIATLKGNSTVRVQSILSHLATSDDPKHFDFVEKQISLFERLSSKLISELNINPIRHILN
TSGISNFPDAQYNMVRLGIGLYGVSNDPAEQKYLENVGTLKSIISQVRTIPAGDSVGYGR
RFMADKETKIATIPIGYADGISRLWGNQIGFVTIKNQKAYIVGSVCMDMLMVDVSHIDCK
EGDSVIIFGESPTVIEMAEALKTIPYEIMTSISQRVKRVFFR
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaatttaaaaagcctgattccggttttaaatgccgagtggacaggctcagat
actgatatttttgtagatcatatttcgatcgacagccgttctttacaaaacggacctcaa
acattgtttattgctctttcgggcgcgaataatgacgctcatttatatattgccgaatta
atagaaaaaggcgttcagaattttgcagttcagtatataccagaaaatgtaaaaggaaaa
gccaatttttttgttgtaaaaaatacgctgaaagcattacaggaattagcagcctattat
cgtgatttattcgatttccctattattggtttaaccggaagcaacggaaaaaccatcgta
aaagaatggcttaattttcttttaagccctgattataatattatccgaagcccaaaaagt
tataactcacaagttggtgttccgctttctgttattgctataaatgaaaaacacaattta
ggaatttttgaagccggaatttcaacggttaacgaaatggttaatcttgagaaaattatc
aaaccaaatattggagttttaaccaatataggttctgcacacgatgaaggatttgaaaat
ctgactcagaaaatcaacgagaaattactgcttttcaaaaagtcagcagtaattatttat
caaaaaaatgaattggtagataaatgtcttttagacttttctgctcaatatccgctagaa
aacagagccttattttcatggagttttgcagatgcctctgcagatgtttttattctgaaa
aaagaaaccaaaaacgattcaaccacaataaaatatcaatataaagacgaaatttttaat
ttagaaattccgttcagcgattctgcttctatcgaaaatgccatttcatgtttattggtt
ttactgcattttgaatatgattttaccattattcaaaacagaatggaaatgctttatcca
gttgaaatgcgtcttgaagttaaaaacggaatccacaattgcagtttaatagacgatagt
tacagctccgattttcaatcgctgaaaatcgctttagattttctggaaagccagaaaaaa
aatgcttcaaaagccgttatactatcagatatttttcaaagcggattttcaaatgaagaa
ctgtattcaaaagtagcgcagttaatttcagataataaaataaaccgtgtcattggaatt
ggaactacaatttcatcttttcaagataagtttccaaacagtacgatgtttcaaaacacg
gctgcatttatcgccgaaattgaaaatttgaatttcaataatgaaaccatattgataaaa
ggcgcaagatcatttcagtttgaagaaattgtttcactgcttgaagaaaaaacgcatgaa
acagttctcgaaatcaatctggatgctataaatcacaatctgaattattttaaatcaaaa
ctggccgatgatgtaaaaatcatggttatggtcaaggcttttggttatggaaacggcgga
ctcgaaattgcaaaactgctcgaacataataaagtaaattatttaggtgtggctttcgcc
gatgaaggaatttcgctgaaaaatggcggcatcaaactgcctattatggttttgaatcca
gaatcgaccagctttccttcgataattcaatacaaacttgaacccgaaatttacagcata
aaaggtttaaatgcctttttgaaaatagccagagaaaagaacttaaaagattttcctatt
catataaaagtcgatacaggaatgcaccgtttaggttttgaggataatacgatcgacgaa
ttaattgcgactttaaaaggaaactcaaccgttcgtgttcaaagtattttatcgcatttg
gcaacgagcgatgatccgaagcattttgattttgtagaaaaacaaataagtttattcgaa
aggttatcttcaaaattaatctcagaattaaatataaatccaatccgccatattttaaac
acttccggaatcagtaatttcccagatgcacaatacaatatggtgcgtttagggattggt
ttgtatggcgtttccaacgatccggccgaacagaaatatctggaaaacgtaggcacctta
aaatcgattatttcgcaggttcgaactattccggcaggtgacagcgttggttacggacgc
cgttttatggcagataaagaaacaaaaattgcaaccattccaattggttatgcagacgga
atttcgagattatggggcaatcagattggttttgtaaccatcaaaaatcaaaaagcctat
atcgtaggaagtgtttgtatggatatgttaatggttgatgtaagtcatatagactgcaaa
gaaggcgattcggtaattattttcggcgaaagcccaacggttatagaaatggctgaagca
ttaaaaaccattccgtatgaaataatgaccagtatttcgcagcgtgtaaaacgagtattt
tttagatag
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