Flammeovirga sp. MY04: MY04_05590
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Entry
MY04_05590 CDS
T04442
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
flm
Flammeovirga sp. MY04
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Gene cluster
GFIT
Motif
Pfam:
HTH_AraC
HTH_18
UPF0122
TetR_N
CDT1_C
Ly49
DUF6262
Motif
Other DBs
NCBI-ProteinID:
QJD09379
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Position
2:complement(573940..574671)
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AA seq
243 aa
AA seq
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MYYIASIPVGMMWIWAVFLDIKDMKGKVGLLKEELQLVIKSNTSEKTKDIRVLLENLEGV
SHGNLDVYKMRIREILNMLTDTTIEAGGDTDSLLQRNVDKTKAIQHSKDATQVKEIIYNE
AVELSEMISDIPQQKNALAVNKVVDYLKGNFSEDISVDEIARMAGLSKAHLMREFKKNIG
QTILQYQTKLRIEASQHLLIDQTVTETAYQVGYNNPNYFSTVFRKVTGFSPIEFQEKNRN
TTL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttgtattatatcgcttctattcctgtggggatgatgtggatttgggccgtattccttgat
atcaaagatatgaaaggtaaagtgggtttgctcaaagaagaattgcagttggtgattaag
tcgaatacaagtgagaaaaccaaagatatacgagtattgctagaaaacttagaaggtgta
tcacatggcaacttagatgtctacaaaatgcgtattcgggaaattttaaatatgcttacc
gataccactattgaggctggcggtgataccgattctttacttcaaagaaatgtagataaa
accaaagcaatccaacacagtaaggatgcgacccaggtgaaagagattatttacaatgaa
gcggtggaactttctgaaatgatatctgatattccacagcagaaaaatgctttggcggtg
aataaagtggtcgactatcttaaagggaatttctcagaagatattagcgtagacgaaatc
gctaggatggctggtttgagcaaggcacatttaatgagggagtttaaaaagaacattggt
cagacgatccttcaatatcagacaaaacttagaatagaggcttctcagcacttattaatt
gatcaaactgtaacagaaacagcctatcaagtagggtataataatccgaactattttagt
acagtttttcgaaaagtaacagggtttagtcctattgaatttcaggaaaaaaatagaaac
accactttgtaa
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