Flammeovirga sp. MY04: MY04_3887
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Entry
MY04_3887 CDS
T04442
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
flm
Flammeovirga sp. MY04
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
AAA_5
AAA
HTH_22
AAA_2
HTH_8
HTH_7
NB-ARC
Torsin
HTH_17
NTPase_1
AAA_19
AAA_7
IstB_IS21
TrmB
HTH_23
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ANQ51231
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Position
1:4884445..4885812
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AA seq
455 aa
AA seq
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MSTSKRFKIFALEDNAVFSKMLNYILSMDDEHEVVMFEKGRDLLNSLDQKPTLITVDYSL
PDMTGEEVIQKISMRMPNVPVIVISGQTDVKIAVKLFKYGVYDYITKDEDIRERLLNAIN
KIKVNESLIEEVEHLREELSHKYEFDNSIIGNSLPMKKVFQLLHKTSDNAINVSITGETG
TGKEVVAKAIHYNSNRAKKPFVAVNIAAIPTSLLESELFGHEKGAFTGAISKRIGKFEEA
NGGTIFLDEIGEMEMSLQAKLLRVIQEREVVRIGGNQIVKLDVRIITATHRDLSKEMMAN
KFREDLFYRLMGVPIYLPPLRERGNDVILLAKHLLEQFIAQNQLEKVTITSEAKQKLLDY
QYPGNIRELKAIIELAAVMCEGNKIQADDLQFSTSSDLESVMSKEMTLKEYNFEIIQRFL
KRYDDNVAKVAKKLDIGKVTIYRYLKEIELSNKVN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatccaaaaggtttaaaatatttgctttggaggacaatgcggtgttctcaaaa
atgctgaattatatattaagcatggatgatgaacatgaagtggtaatgtttgagaaagga
agggatttattaaactctttggaccaaaaacctactttaattaccgtcgattactctttg
cctgatatgacaggagaagaggtgatccaaaaaatttctatgcgaatgcctaatgttcct
gtgattgttatctcaggacagacggatgtgaaaatagccgtaaaactatttaaatatgga
gtttacgattacatcacgaaagatgaggacattcgagagcgtttattaaatgctatcaat
aagataaaagtaaacgaatctttaattgaagaagtagaacatttaagggaagagctttct
cataaatatgaatttgataattctattatagggaacagtttgccaatgaaaaaagtgttt
caacttcttcataaaacatctgataatgccattaatgtttcgatcacaggagagacagga
acaggtaaagaagtagtagcaaaagcaattcattataattctaatagagcaaagaaacct
tttgtcgccgtcaacattgctgctattcctacatcacttttagaaagtgagttatttggt
cacgaaaaaggagcatttactggagcaatctctaaacgaattggaaagtttgaggaagcc
aatggagggacgatttttcttgatgaaattggagaaatggaaatgagcttacaagccaag
cttctaagagtaatccaagaaagggaagtagtacgaattggagggaatcagattgtaaaa
ttagatgtaagaataattacagctacgcatagggatttatcaaaagaaatgatggcgaat
aaattcagagaagatttattctacagattaatgggagtgccaatttaccttcctcctcta
agagaaagggggaatgatgtaattctcttagctaaacacttattagaacaatttatagca
caaaatcagttagaaaaagtaacgataacatcagaagcaaagcaaaaattgcttgactat
caatatccaggaaatatccgtgaattgaaggccattatagaattagctgcagtaatgtgc
gaaggaaataaaatccaagcagatgatcttcagttttctacttcgtctgatttagaatcg
gtgatgtcaaaagaaatgacacttaaagaatataattttgaaattattcagcgattttta
aaacgatatgatgataatgtggcaaaagtggcaaaaaagttagacattggaaaagtgaca
atttaccgatatctgaaagaaatagaattgtccaataaagtaaactaa
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