Flammeovirga sp. MY04: MY04_5322
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Entry
MY04_5322 CDS
T04442
Name
(GenBank) starch-binding protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
flm
Flammeovirga sp. MY04
Pathway
flm00500
Starch and sucrose metabolism
flm01100
Metabolic pathways
flm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
flm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
MY04_5322
Enzymes [BR:
flm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
MY04_5322
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM26
Alpha-amylase
CHB_HEX_C_1
Alpha-amyl_C2
Fn3_assoc
Por_Secre_tail
AMT4_dom_C
Motif
Other DBs
NCBI-ProteinID:
ANQ52654
LinkDB
All DBs
Position
2:1875672..1878560
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AA seq
962 aa
AA seq
DB search
MKKHLLRSLSIIGAILFFTSFSSFAQQGNRSDVLLQGFHWEAADATKKDWWQNLNSKVEE
ISDAGFDAVWLPPPSDAADRAGYLPRKWYDLNSNYGTEAELRTLVQNLGNNNVQAIADIV
INHRVGTTGWADFTEPSLGGCSSICSDDEVNWASNSTEQGAACGDNDSGTQYEAARDLNH
NSFTVRDEIKKWMTWLKNDVGFDGWRYDFVHGFNAYYFAEYNNHTSPYISIGEQWKPYDE
IVGWLNGAQNTSSAFDFPLKYTLHDAVRGNYNYLNGLPSLLGTHGSQAVSFLENHDTEPV
RSEYGDNSFPNNPSDNSQLLQGYAYILTHPGVPVVFYSHYFNYGIQDALKEMIAIRKANG
ITNTSYVQVEGTNDNNYYAAIIDGKVAMKIGGGNWSPGNGWNLKASGPGYAIWDQGTVVT
LPTLTLNTPSGNFPGGCANINLSTSSGDIYYTTNGDIPTDQSTRYNGEFEVCGQAGETVV
VKAVAIDQNGSSDVVEGTYTFNEAASMTVYFKPPNGGTPSIYFWAVTDGDDTTTWPGENM
QVSSAYDGFYEYTINGSCTNLILLENGSKITGDEENICGNVWYDNGWIDEPLPPTPDTVA
PVVSISPNGGDYLDEVQVTISATDDRDASPVIYYSINGGTNQTAISTTTFTLDADATVDY
YAMDASDNSSDVQTATFSVTPSPTPEGGFKVYVQGYNMIHHWGASPVGSVASTNWPGATM
TQENGWFVYEFPIEVVSTNLLFHDGNGNQTDDYTRDKDGWYKDGQWYDQEPVAPEPGNGL
RIHYKSSWGNSTRIHYWGASNGASSNWPGELMTSEGNGWYAYTIEGATSSNLLFHNGSGA
QTSDLNRSGEGWYKDGVWYNSNPESSSSRLVGGSLDLEDQLLTLFPTQVTNEFTIDFNLN
QPSKVFMQAFDLNGQQVLQPINKELLNGHHQLKVDALGLSSGMYIVKIQLGDALHIKRII
VQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatctactacgctctttgtccattattggagctatactattttttacatcc
ttcagttcgttcgcacaacaaggcaacagaagtgatgtccttttacagggtttccattgg
gaagctgctgatgctactaagaaagattggtggcaaaatctaaacagtaaagtagaagaa
atctcagatgcagggtttgatgccgtatggcttccacctccctctgatgctgccgaccgc
gcgggttatctacctaggaaatggtatgatttaaactctaactacggaacagaagctgag
ctaagaactttggtgcaaaatctaggtaataacaacgttcaagctatcgctgatatcgta
attaaccacagagtgggtacaacaggttgggccgattttacggaaccttctcttggtggg
tgttcttctatttgttctgatgatgaagtcaattgggcatcaaatagtaccgaacaaggt
gctgcctgtggcgataatgattcgggtacacaatacgaagctgctcgagatctaaaccac
aactcattcactgttcgagacgaaatcaaaaagtggatgacatggttaaaaaatgacgtg
ggatttgatggttggagatatgactttgttcatggtttcaatgcttattattttgctgaa
tacaacaatcacacaagtccttacatttcaattggtgagcaatggaaaccttatgatgaa
attgtaggatggttaaatggagctcaaaatacttcatcagcatttgattttcctttgaag
tatactttacatgatgctgtgagaggtaactacaattatttgaacggtttaccaagttta
ttaggcactcatggttcacaagcggtttctttcttagaaaatcacgatactgagccagta
agatcagaatatggcgacaattcattccctaacaatccttcggataactctcagctttta
cagggatatgcttatatcctaactcacccaggagttcctgtagtattctattctcattac
tttaattacgggattcaggatgcactaaaagaaatgattgctatccgtaaggcaaatgga
attacaaatacaagttatgtacaagtagaaggtacaaacgataataattattacgctgcg
attatagatggtaaagtagccatgaagatcggtggaggcaactggtctcctggaaatgga
tggaacttaaaggcttctggtcctggatatgctatttgggatcaaggaactgtggttact
ttacctactctaacattaaatactcctagcggtaacttccctggtggatgtgcaaatatc
aacttatcaacaagcagtggcgatatctattatactacaaatggtgatatcccaacggat
caatctacaagatataatggtgagtttgaagtgtgtggacaggctggagaaacagttgtg
gtaaaagcagtagcgatcgatcaaaatggatcttctgatgtggtagaaggtacatatacg
ttcaatgaggctgcaagcatgactgtttactttaagcctccaaatggcggtactcctagt
atttacttctgggcagtaactgatggagacgatacaactacctggccaggcgaaaatatg
caagtatcttctgcatatgatggattctatgaatacaccataaacggttcttgtactaac
ctaattcttttagaaaatggtagtaaaataaccggagatgaagaaaatatatgtggtaat
gtatggtatgataacggttggattgatgaaccacttccacctacaccagatacagttgca
cctgtagtttcaatttctccaaacggaggcgattatcttgacgaggttcaagtcactatt
agtgctactgatgatagagatgcttccccagtaatttattattctatcaatggcggaaca
aatcaaacggcaatttcaacaacaacttttactttagatgcagatgcaactgtagattat
tatgcaatggatgcttcagataattcttctgatgttcaaactgctactttctcagtaact
ccatctcctactcctgaaggaggatttaaagtatacgtccaaggttataatatgattcac
cactggggtgcatctcctgtaggtagtgtagcaagtacaaattggcctggagcaaccatg
actcaggaaaacggttggtttgtatatgaattcccaatcgaagtggtttctaccaactta
ttattccacgatggaaatggtaatcaaaccgatgattacactagagataaagatggatgg
tacaaagatggtcagtggtacgatcaagaacctgtggctccagaaccaggaaacggttta
aggatccattataaatcatcttggggtaatagcacaagaatccattattggggtgcttct
aatggtgcaagctctaattggccaggcgaattaatgacttcagaaggcaatggatggtat
gcatacactatcgaaggagcaacttcatctaacttattattccacaatggcagtggagcc
caaacttctgatttaaacagatcgggcgaaggatggtataaagatggcgtttggtataac
tctaatcctgaatcatcatcaagtagattggtaggaggaagtttagacctcgaagatcaa
ttattgacattattcccaactcaagtaacaaatgagttcactatagatttcaacttaaat
cagccttcaaaagtgtttatgcaagcatttgatttaaacggacagcaagtgcttcaacct
atcaacaaagaattattaaacggacatcatcagttgaaggtagatgctttgggcttatca
agtggaatgtatatcgttaaaattcaattaggtgatgcactgcacatcaaacgaatcata
gtacaataa
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