Fulvivirga ligni: LVD16_24095
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Entry
LVD16_24095 CDS
T09288
Name
(GenBank) endo alpha-1,4 polygalactosaminidase
KO
K01884
cysteinyl-tRNA synthetase, unknown class [EC:
6.1.1.16
]
Organism
flw
Fulvivirga ligni
Pathway
flw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LVD16_24095
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flw01007
]
LVD16_24095
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flw03016
]
LVD16_24095
Enzymes [BR:
flw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
LVD16_24095
Amino acid related enzymes [BR:
flw01007
]
Aminoacyl-tRNA synthetase
Other
LVD16_24095
Transfer RNA biogenesis [BR:
flw03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LVD16_24095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_114
Motif
Other DBs
NCBI-ProteinID:
UII20929
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Position
complement(5702431..5703432)
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AA seq
333 aa
AA seq
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MRLTSKSLSISLLLTSIISITSCGDSDSPEQLGIVLYDQEMRDFVIGISKYAKASDPNFI
VIPQNGQELITEFGNVENDVQMDYVNAIDATGREDMFYGYDNDDEQTPEDEKQYLLDFCL
LFEQNGVEVLTTDYCSTPAKMDDSYAKNEANGFISFAADERDLNSIPAYPQTPYNENDDD
ITNISEARNFLYLINSENYNTKADFLGAIAETNYDAVIMDLFHNEEAFNTQELQQIRTKK
NGGKRLLLCYMSIGEAEDYRYYWNESWQVGNPKFIAAENPDWEGNYKVRYWQEEWQQVIY
GNENAYLDKILTAGFNGVYLDIIDAFEYFRENE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagattaacatctaaatccttatctatcagcttattattgacctccattatttcaatt
acttcgtgcggcgatagtgacagccccgagcaattggggattgttctgtatgatcaggaa
atgcgagattttgtaatcggcatcagtaagtatgctaaagcttctgatcctaattttata
gttataccacaaaatggtcaggaattaattaccgagtttggtaatgtggagaacgacgtg
caaatggactatgtcaatgccattgatgccaccggcagggaggatatgttttatggttat
gataatgatgatgaacaaactcctgaagatgagaagcagtatttattagatttttgtcta
ttgttcgagcaaaatggagtagaagttctcaccacagattattgctcaaccccagctaaa
atggacgattcgtatgcaaagaatgaggccaatggctttatttcatttgcagcagatgag
cgtgatctcaatagtattccagcatacccacaaactccttataatgagaatgatgatgat
attaccaacatttcagaggctaggaattttctctatctgatcaatagcgagaattataat
actaaggctgattttttaggggctatcgccgagactaattatgatgctgtaatcatggat
ctttttcataatgaagaagcatttaacactcaggaactgcagcaaataagaacgaagaag
aatggtggtaagcgtttgctgctatgttatatgagcattggggaagctgaagattatcga
tattattggaatgaatcatggcaggttggcaaccctaaatttattgctgcggaaaatccg
gattgggaagggaattataaagtgagatactggcaagaagaatggcaacaagtaatttat
ggaaatgaaaatgcctatttggataaaatattaaccgctggctttaatggtgtttatctg
gacattatagatgcattcgagtattttagagagaatgaataa
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