Finegoldia magna: FMG_0901
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Entry
FMG_0901 CDS
T00661
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
fma
Finegoldia magna
Pathway
fma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FMG_0901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fma03400
]
FMG_0901
DNA repair and recombination proteins [BR:
fma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FMG_0901
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FMG_0901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Microtub_bd
P-loop_SecA
Kinesin
AAA_7
AAA_22
UB2H
AAA_5
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAG08319
UniProt:
B0S1S9
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All DBs
Position
complement(976612..978582)
Genome browser
AA seq
656 aa
AA seq
DB search
MEFKLHSKFKPTGDQPQAIDKLANGLENGKNHQILKGVTGSGKTFTMANIIQKVQRPTLV
IAHNKTLAYQLASEFREFFPENAVEFFVSYYDYYQPEAYVVQSDTYIEKDSSINEELDKL
RHSATMSLFERRDVIIVSSVSCIYGLGDPIDYENLVISLRPGMEKDRTEVMKKLIDIQYV
RNDINFTRGTFRVRGDSLDIFPASSGEKSVRIEFFGDEIDRITEIDALTGEIVGERNHVA
IYPASHYATTQKKVEKAIVTIEEELEDRLKYFKDHNKLLEAQRLEQRTRYDIEMLKEMGF
CTGIENYSRHMSQRKPGSRPYTLIDYFPKDFVTMIDESHVTVPQIGGMYEGDRSRKTSLV
DYGFRLPSALDNRPLKFSEFESMMNQVIYVSATPGKYEKAKTNEVVEQVIRPTGLLDPKI
EVRPTKGQIDDLVSEINKTIEKGERVLITTLTKKMSEDLTRYLEDLDIKVTYLHSDIDTI
ERMEIIRDLREGKYDVLVGINLLREGLDLPEVSLIAILDADKEGFLRSETSLIQTIGRAA
RNSNGHVIMYGDTITRSMDVAITETNRRREIQEEYNKEHNITPTTINKSVRKRIQNTFVA
EENENYDANKVTEFSKDEIEVIIENLNTEMLKAAEELDFERAATLRDQIRNLKNTY
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaattacattcaaaattcaagcctacaggtgatcaaccacaagcgattgat
aaacttgcaaatggtttggaaaatggaaaaaatcatcaaattttaaaaggtgttactggt
tctggtaaaacttttacgatggcaaatattattcaaaaagttcaaagaccaactctggtt
atagctcacaataaaactttagcatatcagttagctagtgagtttagggaatttttccca
gaaaatgcggttgaatttttcgtttcgtattatgactactaccaaccagaagcatacgtt
gttcaatcggatacttatatcgagaaagattcaagtattaatgaagaattagataaactt
cgccacagtgcaaccatgagtttgtttgagagaagagatgttattatcgtatcttctgtt
tcatgtatttatggtttgggagacccaattgattacgaaaatttggttatatctttgcgt
cctggcatggaaaaagatagaactgaagttatgaaaaaattaatcgatattcaatacgtt
agaaatgatattaactttactagaggaactttcagagtaaggggagatagcttggatatt
ttcccggcatcaagtggtgaaaaaagtgttagaatagaatttttcggtgacgaaatagat
agaattactgaaattgatgcattaactggagaaattgtcggagaaagaaatcacgttgca
atttatccagcgagtcactatgcaacaactcagaaaaaagttgaaaaagctattgtaacc
atagaagaagaattagaagatagattaaaatactttaaagatcacaataaattgttagag
gctcaaagattagagcaaagaacaagatacgatatagaaatgctaaaagaaatgggattt
tgtactggaatagagaattattcaagacacatgtctcagagaaaacctggaagtagacca
tatactcttatcgactattttccaaaagattttgtaactatgattgatgaatcgcatgtt
actgttccacaaataggtggtatgtatgagggagacaggtcgagaaaaacgagcttggtt
gattatggttttagattgccttctgcacttgacaatcgtcctttgaaatttagtgaattt
gaatcaatgatgaatcaggtaatttatgtttcagcaactccaggaaagtatgaaaaagca
aaaactaatgaagttgttgagcaagttattagacctacaggattattagatccaaaaatt
gaagttcgtccaacaaaagggcaaattgatgatttggttagtgaaatcaataagacaatt
gaaaaaggcgaacgcgttttgattactactcttactaaaaaaatgagcgaagatttgaca
agatatcttgaagatttggatattaaagtaacttatttgcattcagatattgatacgatt
gaaagaatggaaatcataagagatttgcgagaaggaaaatacgatgtacttgtaggaatc
aaccttttgagagaaggattggatttaccagaggtttcgttgattgcgattttggatgcc
gataaagaagggttcttgcgttcagagacttctcttatacaaacaataggtagagctgct
agaaattcaaatggtcacgttataatgtacggtgatactattacaagatcaatggatgta
gctataacagaaactaatagacgtagagaaatacaagaagaatacaacaaagagcacaat
attactccaactactataaataaatctgttagaaaaagaattcaaaatacttttgtggca
gaagaaaatgaaaattacgatgctaataaagttacagaattttcaaaggacgagatcgaa
gttattatcgaaaatttgaacacagaaatgctaaaagctgcggaagaattggatttcgaa
agagctgctacacttagagatcaaataaggaatttgaaaaacacttactaa
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