Fomitiporia mediterranea: FOMMEDRAFT_101004
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Entry
FOMMEDRAFT_101004 CDS
T03132
Name
(RefSeq) Pkinase-domain-containing protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03022
Basal transcription factors
fme03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOMMEDRAFT_101004
09124 Replication and repair
03420 Nucleotide excision repair
FOMMEDRAFT_101004
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fme01001
]
FOMMEDRAFT_101004
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_101004
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_101004
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_101004
Enzymes [BR:
fme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
FOMMEDRAFT_101004
2.7.11.23 [RNA-polymerase]-subunit kinase
FOMMEDRAFT_101004
Protein kinases [BR:
fme01001
]
Serine/threonine kinases: CMGC group
CDK family
FOMMEDRAFT_101004
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FOMMEDRAFT_101004
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
FOMMEDRAFT_101004
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FOMMEDRAFT_101004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
Motif
Other DBs
NCBI-GeneID:
18669784
NCBI-ProteinID:
XP_007261586
JGI:
Fomme1_101004
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MDAVEKANAARQRKWIKDQKVGEGTYAVVYRGHDADSGRKVAIKKIKVGQFKDGLDMSAV
REVKYLKELQHQNVIALFDVFSSKTNLNLVLEFLDADLELIIKDRSIVFLPADIKSWLAM
TFRGLEFCHRNWILHRDLKPNNLLIASDGQLKIADFGLARDFADPGYKMTCQVITRWYRP
PELLFGCRYYGTGVDIWSVGCIFAELMLRIPYLPGESDMDQLKTIFRALGTPTEDEWPGH
TKLPDYVTVGQFPKPALRDLFTAATPEALNLLSRCLVYEPRKRISCKDALNHPYFFAPPY
STHPSKLPKTANQLAPRPLEEVDGNVDQNAPGLAVKASAPNTSRLKRKASITDAETRSVA
RRLDFTNIKSP
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgttgaaaaagctaatgctgctcgacaaaggaaatggattaaggatcagaag
gttggagagggtacctatgccgttgtgtatcgagggcatgacgcagactctggacgaaaa
gtcgccatcaagaaaatcaaggtcgggcaattcaaggatggtctcgacatgtccgctgtt
cgggaggtgaaatatttgaaggagctgcagcatcagaatgtcatcgcacttttcgacgtg
ttctcctctaaaactaatcttaaccttgtcctggaattcctggatgcggacctagagctc
attatcaaggaccggtccatcgtgttcctaccagcggatatcaagagctggttagcaatg
actttccgaggtctagagttctgtcataggaactggattctgcaccgtgacttaaaaccc
aacaacttgctcattgcatcagatggtcaactaaaaatagccgatttcggtctagctaga
gactttgcagacccagggtacaaaatgacttgtcaagtcatcacgcgatggtatcgacca
ccagagttgctatttggctgtcgctattatggtactggcgttgacatttggtccgttgga
tgtattttcgccgagcttatgcttcgaataccttacctaccgggtgaaagcgacatggac
cagctgaaaactatctttcgagcgcttgggacgccgacggaagatgaatggccgggtcat
acaaaactgcctgactacgtaacagtgggccagttccctaaaccagcactgcgggatctc
tttacagctgcaactcccgaagcgttgaacctcctcagtcgatgccttgtctacgaacca
cgtaaacgtatctcatgtaaagacgcactcaaccatccatacttcttcgcacctccctac
tctacgcatccctccaaacttccgaagaccgccaaccagcttgctccacgtccactagaa
gaagttgacggcaacgtggaccaaaacgctcctggcctggccgtaaaggcgagtgcacct
aataccagccgactgaaacgtaaggcctcgattacagatgcggaaacacgttctgttgct
cgtcgattggactttaccaacatcaaatcgccttaa
DBGET
integrated database retrieval system
