Fomitiporia mediterranea: FOMMEDRAFT_102459
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Entry
FOMMEDRAFT_102459 CDS
T03132
Name
(RefSeq) TPR-like protein
Organism
fme
Fomitiporia mediterranea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
CHAT
TPR_11
TPR-S
TPR_16
CCDC138_cc
Nup88
Motif
Other DBs
NCBI-GeneID:
18669890
NCBI-ProteinID:
XP_007262874
JGI:
Fomme1_102459
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
METSVTAIQDCFDRSKTHAELAFRYWQSFEQSGEREELEKSITHYRAALEFRPEGHPNRS
ESLHSLALSLRVRYERWGQLEDLEEAIELNRIVLQLRPEGHPDRFKSLDKLAISLAIRYG
QEGRIKDLEEAIDLLRAALDSLSEGHSDRFIPLNSLANSLRFRYERQGRIKDLEEAIELD
RAALELRPEGYLDRHVSLSNLALSLGRRYERQGRTKDLEEAIELGRAALKLRPEYHPHRT
MLLNNLAAFLRTRYQQEGRAEDLEEAIELHRAALELRPEGHPNRSIPLFNLANSLTVQYE
RQGRTKDLEEAIELYRATLDLRPKGHPGRSASLDNLASTLKLRYEQQGGTKDLEEAIELH
RAALDLQPEGHPDRSFSLGNLATSLWARYEQQGGTKDLEEAIGLERAALDLRPEGHTHRF
SSLGNLATYLTTRYKLQGSTKDLEEAIELNRAALELRPEGHSHHSMSLDNLALSLKSRYE
QQGATKDLEEAIELQRAALDLRPEGHPLRSLTLQNLAISLYARVENQWDTEEFEECIQLL
QLAATHEFSGLSYRLYAVQRWARLARLHKHDSASRAYRTSISILQRHPNRSLSLGNLASS
LWARYEQQGRAKDLEEAIGLQRAALDLRPEGHPQRSISLNNLAASLRTRYQQQGRTEDLE
EAIALHRAALELRPEGHPNRSIPLGNLANSLTARYEWQGSTKDLEEAIELERAVLALQPE
GHPHRPRSLANLAISLTTRYEQQGISKDLEEAIELERATLTLQPEGHPHRSRSLGNLANS
LTTRYWQQGRTRDLEEAIELHRVALELLPSDHPDRSISLGNTAQSLRNRYEQQGRTKDLE
EAIELHRAALKLQLEGHPHRSRSLGNLANSLRTRYDQLGRLNDLEEAIWLHRVALDLRPE
GHPLRSLTLRNLANALYYRVEKQCHLGEFEECMQLLELAATHEFSKSSDRILAARRWATL
ARLHKHHTTFSAYRTSISILQHALTIRPTLREQHDLLSGKSSYRMLTSDAASYAIEKNEL
ERAVEILEQGRGLLWSQLRGLRTPLDQLAEANEELADRFRDVNRRLENLATSHEALMTIS
SMDGGKLVRLDGKPGQRSFDELLGLKKRFLHEQEGIINEIRHLPGFESFLKALPFEELQQ
VTLEGPIIMVNHSKYRSDALVIFFRDVSSIICISLDKEFYKDSIQLCNELVHTRRQLKSH
PLEYEKKLCEAMKMLWDRVVSKVISKLTEMGVTKGSRIWWCPTSVLSTLPFHAAGPFKDS
DGTTKYLLDDYISSYTPSLSALINARSNTSTSEPKLLVVGDTVTLRSTRQEIRNIRICMG
GTRPGTTMLLDSSASCPAVVEKLQKVTWVHFACHGHLDPKPFDSSFKLADGGLSLLDIIR
ANVSNAEFAFLSACHTAELSHSGVHDEALHLSAAMQFSGFRSVIGTMWELYDEDGPLFAR
VVYEYMNDCEEGELMYRRAAGGLREAAIELKGREGIPTERWVNFVHIGA
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagcgttactgcaattcaagattgctttgaccgctctaagacacatgctgaa
ctcgcctttcgttactggcaaagcttcgagcaatcgggagaacgggaagaactcgaaaag
tctattactcactatcgtgccgctctcgaatttcgtcccgaagggcatcccaatcgatcg
gaatcgttgcatagcctcgcgctttctcttcgagtgcgatacgagcgatggggccaattg
gaagatctagaagaagccatcgagttgaaccgaatcgtcctccagcttcgacccgaaggc
catcctgatcgatttaagtctctagacaaacttgccatctctcttgcaatccgatatggg
caggaaggaaggatcaaggacctcgaggaagccattgacttgctccgagccgccctcgac
tctctatccgaaggccattctgatcgctttattcctctcaatagtcttgcaaactctctg
agattccgatacgagcggcaaggaaggatcaaggacctcgaggaagccattgagttggac
cgagccgcccttgagcttcgacctgaaggctatcttgatcgccatgtctctctcagcaat
cttgcactctctctaggaagacggtacgagcggcaaggaaggacgaaggatctcgaggaa
gctattgagttggggcgagccgccctcaagcttcgacctgaataccatcctcatcggact
atgttgctcaacaatctcgcagcctttctacgaacccgatatcagcaggaaggaagagct
gaggacctcgaggaagccattgagttgcaccgagccgctctcgagcttcgacccgaaggc
catcctaatcgctctatacctctcttcaatcttgcaaactctctgacagtccaatacgaa
cggcaaggaagaaccaaggacctcgaggaagccattgagttgtaccgagccaccctcgac
cttcgacccaagggccatcccggccgctctgcatctctcgacaatcttgcgagcactctg
aaactccgatatgagcagcaaggagggacgaaggacctcgaggaagccattgagttacat
cgagccgccctcgaccttcaacccgaaggccatcctgatcgctctttctctctcggcaat
cttgctacctctctatgggcccgatacgagcagcaaggagggaccaaggacctcgaagaa
gccattggtttggagcgagccgccctcgaccttcgacccgaaggccatacccatcgcttt
agctctctcggcaatcttgcaacctatctgacgacccgatacaagctgcaaggatcgacg
aaggacctcgaagaagccattgagttgaatcgggccgccctcgagcttcgacccgaaggc
cattctcatcactccatgtctctcgacaaccttgcactctcactgaaatctcgatatgag
cagcaaggagcgacgaaggacctcgaagaagccattgagttgcaacgagctgccctcgac
cttcgacccgaaggccatcctcttcgttccttgacattacagaaccttgcaatttccttg
tatgctcgggttgagaatcaatgggacacagaggaattcgaggaatgtatacagttactg
caacttgctgctactcatgaattctcagggctgtcataccgtctttatgctgtacaacga
tgggcaagacttgcacgattgcataagcacgattccgcctctcgagcttaccgaacgtcc
atatcaatacttcaacgccatcctaaccgctctttgtctctcgggaatcttgcaagctct
ctgtgggcccgatacgagcagcaaggaagggcaaaggacctcgaagaggccattggtttg
cagcgagccgccctcgaccttcgacccgaaggccatcctcaacgctctatatcactcaat
aatcttgcggcgtctctacgaacccgataccagcagcaaggaaggaccgaggacctcgag
gaagccattgcgttgcacagagccgccctcgagcttcgaccagaaggccatcctaatcgc
tctatacctctcggcaatcttgcaaactctctgacagcccgatacgagtggcaaggaagc
acgaaggacctcgaagaagccattgagttggagcgagccgtcctcgcccttcaacccgaa
ggccatcctcatcgccctaggtctcttgccaatctcgcaatctctctaacaacccgatac
gagcagcaaggaatttccaaggatctcgaggaagctattgagttggagcgagccaccctc
acccttcaaccggaaggccatcctcatcgttctaggtctcttggcaatcttgcaaactct
ctgacaaccagatactggcaacaaggaaggacaagggacctcgaggaagccattgagttg
caccgagttgccctcgagcttctaccctcagatcatcctgatcgctctatctctctcggc
aatactgcacagtctctgagaaaccgatatgagcagcagggaaggacgaaggacctcgag
gaagccattgagttgcaccgagccgccctcaagcttcaacttgaaggccatcctcatcgc
tctaggtctctcggcaatcttgcaaactctctgagaacacgatacgaccagctagggagg
ctgaacgacctcgaggaagccatttggttacatcgagtcgccctcgaccttcggcccgaa
ggccaccctcttcgttccttaacactacggaaccttgcgaatgccttatattatcgggtt
gagaagcaatgtcacttaggggagttcgaggaatgtatgcaattactagaacttgctgct
actcacgaattctcaaagtcgtcggaccgcattcttgctgcacgacgatgggcaacactt
gcacgattgcacaagcatcacacaaccttttcagcttaccgaacgtccatatcgatactt
caacatgctctcaccatacgtccaaccctccgcgaacaacatgaccttctctcagggaaa
agttcttacagaatgttgacttctgacgcggcgtcctacgcgatagagaaaaatgaattg
gaacgagctgtagagatacttgagcaagggaggggcttgctttggtcacagttgcgcggc
ctcaggactcccttagatcagcttgcagaagcgaatgaagaactcgccgacagattcagg
gacgtcaatcgccggctggagaacctcgcaacatcacacgaagcgttaatgaccatctca
tccatggatggaggcaaattagttagactagatggtaaaccaggacagagatcatttgac
gaactactgggattaaagaagcgctttctgcacgagcaagagggtattataaacgagatt
cgacatttgcctggattcgagagcttccttaaagccttgccatttgaagaactgcagcag
gtcacattggagggaccaattatcatggtgaaccatagcaaatatcggtccgatgccctc
gttatcttctttcgtgacgtttcatccataatttgcatttcactggacaaagagttctat
aaggacagcattcaattgtgcaatgaactcgttcatacacgacgacagctcaaatcgcat
ccactagaatatgaaaagaaactttgcgaagcgatgaagatgttatgggatagagttgtc
tccaaggtcattagtaaactgacagaaatgggggtcacaaaagggtctcgcatttggtgg
tgccctacgtccgtgttatctacactcccgttccatgctgcaggaccattcaaggattcg
gatggaactacaaaatacttgttagacgattacatttcgtcgtacactccgtcactcagt
gcattgattaatgcccgaagtaatacaagcacaagtgaaccaaaattgcttgttgtcggc
gacactgttacgctacgatcaactcgacaggaaattcgcaacatccgtatctgcatgggc
ggcaccagaccaggaactacgatgctactcgatagcagtgcgtcttgtcccgcagtggtg
gagaaactccaaaaagtcacatgggttcactttgcttgccatggtcatctcgacccaaaa
ccttttgactcgtcgttcaagctcgctgacggtggtttgtcattgctcgatattatccga
gctaatgtctcaaatgccgaatttgcatttctctctgcatgccatactgcagagctatct
cactcaggtgtgcacgacgaggcacttcatctatcagcagcgatgcagttcagcggattc
cgaagcgtgatcgggacgatgtgggaactatacgatgaggatggacctctgttcgcgcgc
gtggtttatgaatacatgaatgactgtgaggaaggcgagttgatgtataggagggcggct
ggaggacttcgagaagcagcaatagagttgaaaggacgggaagggattcctactgaacga
tgggttaatttcgtgcatataggtgcttga
DBGET
integrated database retrieval system