Fomitiporia mediterranea: FOMMEDRAFT_109275
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Entry
FOMMEDRAFT_109275 CDS
T03132
Name
(RefSeq) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme00250
Alanine, aspartate and glutamate metabolism
fme00410
beta-Alanine metabolism
fme00430
Taurine and hypotaurine metabolism
fme00650
Butanoate metabolism
fme01100
Metabolic pathways
fme01110
Biosynthesis of secondary metabolites
Module
fme_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FOMMEDRAFT_109275
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FOMMEDRAFT_109275
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FOMMEDRAFT_109275
00430 Taurine and hypotaurine metabolism
FOMMEDRAFT_109275
Enzymes [BR:
fme01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
FOMMEDRAFT_109275
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
18670406
NCBI-ProteinID:
XP_007267523
JGI:
Fomme1_109275
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MALARHVNPDKLLQDARDHKAKNHAHHLTNTDPTSSVSAYGARYGTYPLPKYKIPSKGTD
AEATYQLVHDELSLDGSPLLNLASFVHTWMPAPADKLMQENMNKNLIDQDEYPMTQMIHE
RCVSMLADLWNAPNGKQAIGTATTGSSEAIQLGGLAMKRIWQEKRKAAGKSIHEPGPNIV
MGANAQVALEKFARYFEVECRLVPISEESKYRLDPKRAMEYVDENTIGVFVILGSTYTGH
YEPVKEMSDLLDEYEKKTSHHVPIHVDAASGGFVAPFATPKLAWDFRLPRVVSINTSGHK
FGLAYVGVGWVIWRDKAHLPKDLIFELHYLGSIEYSFSLNFSRPAAPIIAQYFNFVHLGF
EGYRRIALADLKNARVLSRALEKSGYYHVLSDVHRFADGGSSVIEGAKQAAGVKNEEDVE
NYIPCLPVISFRFSDQFKSKYPNIQQKWMQTLLRSKGWIVPNYELAPNLQNVDILRVVVR
ENFSEALVDRLVTDIIELTEGLMKDDSPVHALSTLGATHSSARRGNGKLDEDSGPKSSGT
YAKQC
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcaaggcacgtcaaccctgacaagcttctccaggacgcgagggaccacaag
gctaagaaccatgcccatcacctcactaatacggacccaacctcctccgtttcggcctat
ggagcgcgttatgggacttacccgctgccgaagtacaagatcccgtcaaagggcacggac
gcagaggcaacatatcagcttgtacatgatgagctttcacttgatggctctccacttctc
aacctcgcttcattcgtgcatacatggatgcccgctcctgcagataagcttatgcaagag
aacatgaacaagaacttgattgaccaggatgagtaccctatgacgcagatgatccatgaa
cgctgtgtctccatgctcgcggatctttggaatgctccgaacggtaagcaggctattgga
acagctacgacaggttcctccgaggctattcaacttggtgggcttgccatgaagcgcatc
tggcaagagaaacgcaaggctgctggtaaaagtatccatgagcccggacccaatattgtc
atgggcgcaaatgcgcaggttgctcttgagaaattcgctcgttatttcgaggttgagtgt
cgcttggttccgatctccgaggagagcaagtataggctggacccgaagagggccatggag
tacgtcgacgagaatacgattggcgtgttcgtcatccttggaagtacatacactggtcac
tatgaacccgtcaaagagatgtccgatcttctcgatgagtatgagaagaaaaccagccat
catgtccctattcacgtggatgcagcttctggaggattcgtcgcaccgtttgcaactccc
aagctagcctgggatttccgtcttccgcgggttgtctccataaacacgtctggacataag
tttggactcgcatatgttggtgttggttgggtaatctggcgtgacaaggcgcaccttccg
aaggacctcattttcgagctgcactatttggggtccatcgagtacagtttctcgctcaac
ttctcgcgcccggctgcacccattatcgcccagtacttcaactttgtacatctcggtttt
gagggttatcgccgtattgcgctggcagacctgaagaatgcccgtgtactgagtcgtgcg
ctcgaaaagagtggatattaccatgttttgagcgatgtgcatcgctttgcggacggcggt
tcgagcgtgatcgaaggtgcaaaacaagctgcgggagtcaagaatgaagaggatgttgag
aattatattccgtgcctcccagtaatctcgttccgcttttctgaccagttcaaatccaag
tacccgaacatccaacagaagtggatgcagacgcttctccgttcgaagggatggattgta
ccaaattatgaactcgcacctaatctgcaaaacgtcgacatccttcgtgtcgttgtgcgg
gagaacttctcggaagcacttgtcgaccgcttggtcactgacattatagagcttactgag
ggtctcatgaaggacgactctccggtgcacgcgctcagcacacttggcgcgactcacagt
tccgctcgtcgtggcaatggcaaactcgatgaagactcgggacccaagagctctggcacg
tacgcaaagcagtgctaa
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