Fomitiporia mediterranea: FOMMEDRAFT_130910
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Entry
FOMMEDRAFT_130910 CDS
T03132
Name
(RefSeq) glycoside hydrolase
Organism
fme
Fomitiporia mediterranea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_20
Alpha-amylase
Alpha-amylase_C
Motif
Other DBs
NCBI-GeneID:
18671643
NCBI-ProteinID:
XP_007261795
JGI:
Fomme1_130910
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MVAFLRPRDAVYPFRKDANRISSSLAGVDAVGNESETIINFGLGWLTDLWSDAQPTFARY
LSLLLLYLMLLRIIQGLLPLTICVSCVTTTSAAPSGTNDVIIQMFEWTWDSIAAECASFI
GPAGYGFIQASPAQEHVTGDQWWTDYQPVSYILTSKRGNRDQYTNMINTCHASGVRVIAD
TIFNHMSGSDSDVGVAGSSFTHYDYPGIYEYQDFHHCGLEPGDDIVNYDNRVEVQTCELV
NLADLATETEYVRSRLAEYGNDLLSLGVDGLRLDAAKHIAATDLANITSRLNRPAYLTQE
VIYGEGEPITPAEYVGIGMFRYTTALKNAFLSDGIASLQNLDDQGWVPGDDANVFVTNHD
TERNGNSLNDNSPSNTYTLAMIFSLAHPYGTPTILSSYSGFTNTDAGAPNGGAGTCSTDG
GANGWLCQHRWPAITGMVGFRNNISVASPNALTNWVSPSSQRIAFARGAAGFVAINNEDS
AWSMTFNSGLPAGSYCDVVAGVPNGAVCAGPSYTVASDGTFTPIISARNALAIHIGALGT
GSSDGGGSTPSTVAVTFDETATTTFGENIFLVGSIPELASWDTDNAIALSADTYPVWSVT
VSLPASTSFEYKFIRKETDGSIQWESDPNRSAMTGTGAETISASWR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcctttcttcggccccgcgacgcagtttatccgtttcgcaaagatgcaaatagg
atctcgtcatcactcgctggcgtagatgccgtggggaacgagtcggaaacgattataaat
ttcggactgggctggctaacagacctatggtcagacgctcagcccacattcgctagatac
ttgtcgctattgctcttatacctaatgcttctccgaattatccaaggattactaccattg
acaatatgcgtgtcctgcgtcactaccacatcagcagcaccatctggcactaatgacgtc
attatccagatgtttgagtggacgtgggacagcattgctgctgaatgtgcatctttcatc
ggccctgcaggatatggctttatacaagctagcccagctcaagaacatgtcacaggagat
caatggtggaccgattaccaaccggtttcatacatcctcacttcgaagcgtggtaaccgt
gaccagtacacaaatatgatcaatacctgccatgcttcgggagtaagggtaattgctgat
accattttcaatcatatgtccggatcagattctgacgttggcgtcgctgggagttcattt
acgcactacgactaccccggcatctatgagtatcaagacttccaccactgcgggcttgaa
ccgggagacgacattgtcaattacgacaatcgagtcgaggttcagacgtgtgaactagtg
aatctcgcggacctagcgacagagacggagtacgtccgctcacgtcttgccgaatacggg
aatgatctactgtctcttggagtggatggcttgcgccttgatgcagctaaacatattgcg
gcaacggaccttgctaatattaccagccggttgaaccgcccagcataccttactcaagag
gtcatctatggtgagggagagcctattacaccagcagaatatgtaggaattggtatgttc
cgctacaccaccgctcttaagaacgctttcctgagtgatgggattgcaagtctgcagaac
ctcgatgatcaaggttgggtgcccggggacgatgcaaacgtttttgttacgaatcatgac
actgaacgaaacggcaattcactcaacgacaattcgccctcaaatacgtatacactagcg
atgatcttctctttagcacatccgtatggaacgccgaccattctgtccagctattctggg
tttacaaacacagacgcaggtgcaccaaatggcggtgcagggacatgttctactgacgga
ggcgccaacggatggctgtgtcagcatcgatggcctgctatcacaggcatggtcggcttc
cgcaacaacatcagtgtcgcatcacccaacgccctcacgaactgggtttctccgagctca
cagcgcatcgcattcgcgcgtggcgcagcaggctttgtagcgatcaataacgaggactca
gcctggtcgatgacgtttaacagtggattacccgcagggtcgtattgtgacgtcgttgct
ggggtgccaaacggcgcggtgtgtgcaggaccgtcgtataccgtggcatcggacggtacc
ttcactccgattatctcggcacgaaacgctcttgcaatccatatcggtgctcttgggacc
ggaagtagtgacggcggaggaagcactccgagcaccgtcgcagtcacattcgatgaaacg
gctactacaacctttggcgagaatattttcttagttggaagcataccggagcttgcttcg
tgggacacagacaatgctatcgccttatcagcagacacatatcctgtctggtccgtaacg
gtctctctacctgcaagcacgagcttcgaatacaagtttatccggaaggagacggacggc
agcatccaatgggagagtgacccaaatcggagtgctatgacgggaacgggggcagagact
atatcggcctcctggagatag
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