Fomitiporia mediterranea: FOMMEDRAFT_141004
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Entry
FOMMEDRAFT_141004 CDS
T03132
Name
(RefSeq) DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOMMEDRAFT_141004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_141004
Enzymes [BR:
fme01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FOMMEDRAFT_141004
DNA repair and recombination proteins [BR:
fme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOMMEDRAFT_141004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
ChaC
Motif
Other DBs
NCBI-GeneID:
18672566
NCBI-ProteinID:
XP_007267084
JGI:
Fomme1_141004
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MPVTRSASRQSSTAANNPPVSGGKRKAEPRTKEEVSNGAVKKARGSRAKKAAKVARDAEN
GANSATPIVPAIVQVPATPATFLPAVLSFSFEDAKQHLVSVDPRFEDLFSKLKCRPFEHL
ERVDPFRTLATSILGQQISWLAARSIVHRFIRLFDPSLPEKPTDSGSTSNPDSFFPSAHQ
VVAQDIATLRTAGLSGRKAEYVQDLAARFADGRLSNEKIMQANDEELYEMLTAVRGIGKW
TVDMFAIFSLRRPDIMPVGDLGVQRGVVRWFLSLHSAKHPVAISPKKLPSNYDKDKGESQ
ETNNNISAIESQDVVMPENPQPERASTPDAAAFPPAPVTPVKGRKGSKNSGEDPEVPAPP
PAFTPSINRTLNKVLPNKFHPPSLPEGLSVKDLQSRLEGKKQKKGVFLTPKEMEELTEPW
KPYRSIGVYYMWALSEGDKS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttacgcgttctgcaagtcgacaaagttcgactgcagctaataacccacctgtt
tctggtggaaaacggaaggctgaacctaggacgaaggaggaagtatcaaatggtgctgtg
aagaaggcaagaggatcaagagctaagaaggcagccaaagttgctagagacgcagaaaat
ggcgcgaatagtgctactccgattgttccagcgattgttcaagttccggcaaccccggca
accttccttccagcagtcttgtctttttcttttgaagatgcgaagcagcaccttgtttct
gtggatccgcgatttgaagatttgtttagtaaactgaagtgtaggccttttgaacatttg
gagcgggttgatcctttccggactttggctacttcgatattaggccaacaaatctcgtgg
ctcgcagcgcgctctatcgttcacaggttcattcggttattcgacccgtcgttacctgaa
aagccaaccgattcaggatcgacaagtaacccagattcgttcttcccttctgcacatcag
gtggttgctcaggatattgctacgctgaggactgctggacttagcggacgtaaagcagag
tatgtgcaagacttggctgcgagatttgcggatggcagattatcgaatgaaaagataatg
caagctaacgatgaagagctttatgagatgcttacggctgttcgtgggattggaaagtgg
acagtggacatgttcgctattttctcactaaggcgtccagatataatgccagttggcgac
ctcggcgttcagcgtggagtagtccgatggttcctctccttacactcagccaaacatcca
gttgcgatttccccgaaaaaacttccaagtaattacgacaaagataaaggagaatcacaa
gaaacgaacaataatatcagcgcgattgagtcacaagatgtggttatgccggagaaccct
cagcctgagagagcttcgacgccagatgctgcggctttcccgcctgctcctgttacacct
gttaaagggcggaaaggttctaagaactctggagaggacccggaagttccagctccaccc
cctgcatttactccttcgatcaataggactctcaataaagtgttaccgaataagttccat
ccgccatctcttccggagggcctgtctgttaaggatttgcagagtcgtctggaagggaag
aaacagaaaaagggagttttcttgaccccgaaagagatggaggagcttaccgagccgtgg
aaaccatacaggagtataggtgtctattatatgtgggcgttgtccgaaggcgacaaatcc
tag
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integrated database retrieval system
