Fomitiporia mediterranea: FOMMEDRAFT_158829
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Entry
FOMMEDRAFT_158829 CDS
T03132
Name
(RefSeq) zf-U1-domain-containing protein
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
fme
Fomitiporia mediterranea
Pathway
fme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOMMEDRAFT_158829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fme03041
]
FOMMEDRAFT_158829
Spliceosome [BR:
fme03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
FOMMEDRAFT_158829
Complex B
FOMMEDRAFT_158829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-U1
Motif
Other DBs
NCBI-GeneID:
18675013
NCBI-ProteinID:
XP_007268952
JGI:
Fomme1_158829
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MPKHYCDYCDVYLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITSAYDSG
GGPPPGGFNFAPPPSGFGGPPPFGGFPGAGAPPFPGPGGFGGPPPPGMMGAPPFPPPAGM
APPNFPPGAPGAPPFPPPNANGQPPFLPPPNFMNGAPGAPGQPPTNFSPPPMNANGPPPQ
NYGPPPGSNASQPGGPNADWSSEYEYDVSDV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacactactgtgattattgcgatgtttacttaacacacgactcagcctcagtg
cgtaaggcacacaacagcggcaggaatcaccttgcgaatgtccgtgattattacgcatct
ctcgggcatgacaaggcgcagagcatcatcgaccagatcacgtctgcatacgattctgga
ggtggtccgcctcccggaggattcaacttcgctcctccgccgagtggtttcggtggacca
ccgccattcggcggttttcccggtgcaggtgctcctccctttcctggacctggtgggttt
ggtggaccacctcctccgggcatgatgggcgctccaccatttcctcctcctgccggcatg
gcgccacctaactttccgcctggagcaccaggtgctccacccttccctccaccaaacgca
aatgggcaacctccattccttccgcctccaaatttcatgaatggtgctcctggcgcaccg
ggacagccgccgaccaactttagccctccaccaatgaatgctaacggtccgccaccacag
aactatggacctccgcctggttcaaatgcctctcaaccaggtggcccaaatgctgactgg
tcctccgaatacgaatatgacgtttcagacgtctga
DBGET
integrated database retrieval system
