KEGG   Fomitiporia mediterranea: FOMMEDRAFT_158843
Entry
FOMMEDRAFT_158843 CDS       T03132                                 
Name
(RefSeq) hypothetical protein
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
fme  Fomitiporia mediterranea
Pathway
fme03013  Nucleocytoplasmic transport
fme03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    FOMMEDRAFT_158843
   03015 mRNA surveillance pathway
    FOMMEDRAFT_158843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fme03019]
    FOMMEDRAFT_158843
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_158843
Messenger RNA biogenesis [BR:fme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FOMMEDRAFT_158843
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     FOMMEDRAFT_158843
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 18675016
NCBI-ProteinID: XP_007268967
JGI: Fomme1_158843
LinkDB
Position
Unknown
AA seq 285 aa
MCVTIGSFSDLLEENIMAEKTVVDREKTAPFLMRTFVKVGGYHRTEFFEDGTLPTTDEHQ
IFTWRDATLKEILTTLRLTTTNTEIRHPVAKFGFRSLYADSSTKGRITTRDLGMVYSRDI
LGEPGSLEAPAPRLLQDSEDEVDTGRTLEELRFMPGDFMCISVILPKHVTAPDASIRGAA
AGAPTSGVANGWKNGPSSPPGPPGGLGRGGGHWRGGSEPGGGRGRIGRGDRPRRDLDRDI
VERDRRIPPPRRGRDSPPYRDTYDRRDRRSRSPYSHSHSPPRRYR
NT seq 858 nt   +upstreamnt  +downstreamnt
atgtgcgtcacgattggttcgttctctgaccttcttgaagaaaacattatggcggaaaag
acagttgtcgacagggagaagacggcgccatttttaatgcggacattcgttaaggtcggg
ggttaccatcgaaccgagttttttgaggatggaacattgccaacgacggacgagcaccaa
atttttacatggagggacgcaacgttgaaagaaatcctgactacgctacgcctcacaacg
accaacaccgaaattcgacacccggtcgcaaaattcgggttccgctctctgtacgctgat
tcttctacaaaaggacgcatcacgactcgagaccttggtatggtctactcgcgcgatatt
ctcggcgaaccaggttcgctggaagctcctgctcctcggttattacaggactcggaggac
gaagtcgacacagggcgcacgctagaggagttgcgattcatgcctggagactttatgtgt
atctccgttattcttccaaaacacgtaacagctccggatgcgtcaattcgaggagcagca
gccggagctccaacatcaggtgtcgcgaacggatggaaaaatggtccgtcaagtccgcct
ggtccgcctggtggactaggccgtggtggaggacactggagaggaggctccgagcctggt
ggaggacgtggccggattggacgcggtgaccgtcctcggagagatctggaccgggatatc
gtagaacgcgacagacgaatcccgccacccagacgcggacgcgactcaccaccttatagg
gacacgtatgaccgtcgcgaccgacgttcacggtccccgtactcgcattcacattctcca
cctcggaggtatcgttaa

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