Fomitiporia mediterranea: FOMMEDRAFT_158843
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Entry
FOMMEDRAFT_158843 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K14324
histone deacetylase complex subunit SAP18
Organism
fme
Fomitiporia mediterranea
Pathway
fme03013
Nucleocytoplasmic transport
fme03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FOMMEDRAFT_158843
03015 mRNA surveillance pathway
FOMMEDRAFT_158843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fme03019
]
FOMMEDRAFT_158843
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_158843
Messenger RNA biogenesis [BR:
fme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FOMMEDRAFT_158843
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
FOMMEDRAFT_158843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
18675016
NCBI-ProteinID:
XP_007268967
JGI:
Fomme1_158843
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MCVTIGSFSDLLEENIMAEKTVVDREKTAPFLMRTFVKVGGYHRTEFFEDGTLPTTDEHQ
IFTWRDATLKEILTTLRLTTTNTEIRHPVAKFGFRSLYADSSTKGRITTRDLGMVYSRDI
LGEPGSLEAPAPRLLQDSEDEVDTGRTLEELRFMPGDFMCISVILPKHVTAPDASIRGAA
AGAPTSGVANGWKNGPSSPPGPPGGLGRGGGHWRGGSEPGGGRGRIGRGDRPRRDLDRDI
VERDRRIPPPRRGRDSPPYRDTYDRRDRRSRSPYSHSHSPPRRYR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtcacgattggttcgttctctgaccttcttgaagaaaacattatggcggaaaag
acagttgtcgacagggagaagacggcgccatttttaatgcggacattcgttaaggtcggg
ggttaccatcgaaccgagttttttgaggatggaacattgccaacgacggacgagcaccaa
atttttacatggagggacgcaacgttgaaagaaatcctgactacgctacgcctcacaacg
accaacaccgaaattcgacacccggtcgcaaaattcgggttccgctctctgtacgctgat
tcttctacaaaaggacgcatcacgactcgagaccttggtatggtctactcgcgcgatatt
ctcggcgaaccaggttcgctggaagctcctgctcctcggttattacaggactcggaggac
gaagtcgacacagggcgcacgctagaggagttgcgattcatgcctggagactttatgtgt
atctccgttattcttccaaaacacgtaacagctccggatgcgtcaattcgaggagcagca
gccggagctccaacatcaggtgtcgcgaacggatggaaaaatggtccgtcaagtccgcct
ggtccgcctggtggactaggccgtggtggaggacactggagaggaggctccgagcctggt
ggaggacgtggccggattggacgcggtgaccgtcctcggagagatctggaccgggatatc
gtagaacgcgacagacgaatcccgccacccagacgcggacgcgactcaccaccttatagg
gacacgtatgaccgtcgcgaccgacgttcacggtccccgtactcgcattcacattctcca
cctcggaggtatcgttaa
DBGET
integrated database retrieval system