Fusarium musae: J7337_009436
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Entry
J7337_009436 CDS
T09538
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
fmu
Fusarium musae
Pathway
fmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
J7337_009436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fmu03041
]
J7337_009436
Enzymes [BR:
fmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
J7337_009436
Spliceosome [BR:
fmu03041
]
Complex C
Other components
Step II factors
J7337_009436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
AAA_30
T2SSE
AAA_19
nSTAND3
ABC_tran
TsaE
PhoH
AAA_16
SRP54
Motif
Other DBs
NCBI-GeneID:
68317292
NCBI-ProteinID:
XP_044677626
LinkDB
All DBs
Position
7:778813..782403
Genome browser
AA seq
1196 aa
AA seq
DB search
MDDLANLELLSLVSKVSSELKNHMNLDDKTVAEFLIDKRTKSSNFDDFRDDLAKALPSIP
LSLIESIDRLVLALHPQFKGKVKANHEEHHSRTLEEKEKVFSGLALPDKEPARDDGSGAF
DDTLALLEGLEGKAKKEKSARKRSRSPRDDYKESRRRRRRSRSGERRKRDKYRSRSRSHE
RGDEDWRDGYRDSRKDRRGRRRHEDDDDDRFRNAPAPEVDDSPQLHKVYEGHVTGLKDFG
AFINLHNVKGRVDGLVHVSRMSAGQRVNHPSDLVSHGQKVWVKVTSLDKDQNGRDRVGLS
MKDVDQSTGEDLEPQARMTTGANMEALGGGPRDGFAEPTGMPRDNLGPPRRQKKRMTSPE
RWEIRQLIASGVAKASDYPDLEEDYNATLRGDGDLELEEDVDIEVREEEPPFLAGQTKQS
LELSPIRVVKAPEGSMNRAAMSGTNLAKERKELKQQEADAAAKDEPKENLSSQWQDPMAD
PDKRKFASDLRNARKNQPSEDVPEWKKAVIPKGQSLGKRTNLSIKEQRESLPVYAFREQL
IKAVHENQILIVVGETGSGKTTQLTQYLAEAGFANDGIIGCTQPRRVAAMSVAKRVAEEV
GCKLGEEVGYTIRFEDCTSPSTKIKYMTDGMLQREILVDPDMSRYSCIMLDEAHERTIAT
DVLFALLKKALKRRPDMKVIVTSATLDADKFSAYFNECPIFTIPGRTYPVEILYSKEPES
DYLDTALVTVMQIHITEPKGDILLFLTGQEEIDTACEVLYERMKALGPNVPDLIILPVYA
SLPTEMQSRIFDPAPPGSRKVVIATNIAETSITIDEIYYVVDPGFVKQNAYDPKLGMDSL
VVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTSIPEIQRQNLSTTILMLKA
MGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAKVLI
AAVDLECADEVLSIVSMLNIPTVFYRPKEKQSQADQKKAKFHDPHGDHLTFLNVYNSWKQ
SGYSAPWCFENFIQARSMRRAKDVRDQIVKIMDRYKHKIKSCGRDTEKVRRALCAGFFRN
AARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHELILTSKEYMHCTTSIEPKWLV
EAAPTFFKVAPTDKLSKRKKAERIQPLYNKFATEDDWRLSAQRKGGRGGGGGGTWG
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttggcaaatctcgagttgttatccctcgtttcaaaggtctcttccgagctg
aagaatcatatgaacctagacgacaagacggtcgccgagtttcttatcgataaaaggacc
aaaagcagcaatttcgacgactttcgcgatgatctagcaaaggccctcccctcgattcct
ctcagccttatagagagtatcgaccgtttagtacttgctctgcaccctcagttcaaggga
aaagtaaaggccaaccacgaagagcatcattcgagaaccctagaggagaaggaaaaggtc
tttagtgggctcgcgctgccggataaggagcctgcgcgcgacgatggatctggcgcattc
gacgacacactagcactgttagagggtctcgaagggaaggcgaaaaaggagaagtccgcg
agaaaacgaagtcggagcccccgcgacgattacaaagagtcaaggaggaggaggaggagg
tcgcgctcaggagaacgacgaaaacgagacaaataccgatcgcggtcgcggtcgcatgag
cgaggcgacgaagattggcgtgacgggtaccgtgattcgcgcaaagatcgacgagggcgt
aggcggcacgaagacgatgacgacgaccgatttcgcaatgctccagctcctgaagttgat
gattcaccgcaattgcacaaggtctacgaaggacatgtaacgggattgaaagatttcggt
gcctttatcaacctgcacaatgtaaaaggcagagtcgatggcctagtacacgtttcccga
atgtctgctggacagcgcgtcaaccacccgtcggatttggtgtcgcatggacaaaaagtc
tgggtcaaggtgacaagtctcgataaggatcaaaacggccgcgatcgcgtgggcttgtca
atgaaggacgttgatcagtcgactggggaggatctagaaccacaagctcgaatgacaact
ggtgccaatatggaagcgctgggaggaggtccaagagacgggtttgcggaaccaaccggc
atgcctcgagataacttggggcctccacgacgacagaaaaagagaatgacttctcccgaa
aggtgggagatcagacagttgatcgcatcgggagtggccaaggcttcagactaccctgac
ctggaagaagactacaacgcgactctccgcggagatggcgatcttgagcttgaagaggac
gtcgacattgaggttcgcgaggaggaaccgccattcttggccggacagaccaagcagtcc
ctggaattatcacctattcgcgttgtcaaggccccagaaggctctatgaatcgagccgct
atgtctggtaccaacttggcgaaggaacgtaaggagctcaagcaacaagaagccgatgcg
gccgcgaaggacgaacccaaagagaacctgtcctctcaatggcaagaccctatggctgat
cccgataagaggaagtttgccagcgatttgaggaatgccaggaagaaccagccctctgaa
gatgtgcctgaatggaaaaaagcagtcattccaaagggacagtctctgggcaagcgcacg
aacctcagcatcaaggaacaacgagagtcgcttcctgtatatgcattccgagagcaactg
atcaaggctgttcacgagaaccagatcttgatcgtagttggagaaacaggatcaggaaag
acgacccagttaacacagtatctcgctgaagctggctttgccaatgatggtatcattggc
tgtacgcaacctcgtcgtgtggctgctatgtccgtcgctaagcgagtagcagaagaagtt
ggatgcaagcttggtgaggaggtcggatatacgattcgatttgaagactgcaccagtccc
tcaaccaagatcaagtacatgacagatggtatgcttcagcgtgagattctggtagatccc
gacatgtcgcgatactcctgtatcatgcttgacgaagctcacgagcgtaccattgccacc
gatgtgctgtttgccttgctaaagaaggctctcaaacgacgtcccgatatgaaagtcatt
gtcacctcagctactctcgatgcagacaaattctctgcatacttcaacgaatgtcctatt
ttcacgattcccggtcgaacataccctgtcgagatcctctattcaaaagaacccgagtcc
gattacctcgataccgctcttgtcacagtcatgcaaatccatattactgagcccaagggc
gacattcttcttttcttgacaggccaagaagaaattgacacggcatgcgaagtcttgtat
gagagaatgaaagccttagggcctaatgtgccagacctcatcattcttcctgtctacgct
tcacttccgacagaaatgcaaagccgaattttcgatcctgcgccccctggcagccgtaag
gttgtcatcgccaccaatattgcagagacttccattactatcgacgagatttactacgtc
gtcgacccaggtttcgtcaagcagaacgcttacgaccccaagttgggtatggactctctg
gtagttacaccaatttctcaggcccaggcaaaccaaagagcaggacgagcagggcgaact
ggacctggaaagtgtttccgtttatacacagaggcggcttaccagtctgaaatgctgccg
actagtattcccgaaatccagaggcagaacttgtccacaacaatcctcatgctcaaggca
atgggcattaacgacttgcttcactttgacttcatggacccgccccctatcaacaccatg
cttacagcattggaggagctatatgccctcagtgccctcgacgacgagggtctgctcact
cggctggggcgaaagatggccgatttccctatggaaccttccctagccaaggtgcttatc
gcggctgttgatctagaatgtgcggatgaagtcctcagcatcgtgtcgatgcttaacatc
ccaaccgtcttttaccgccccaaagagaagcagtctcaagcagatcaaaagaaggccaag
ttccacgatcctcacggcgaccacctaaccttcctcaacgtctacaactcatggaagcag
agcggttactcagcaccctggtgtttcgagaactttatccaagcgcgttccatgcgtcgc
gcaaaagacgtccgcgatcaaatcgtcaagatcatggaccgctacaaacacaagatcaag
tcctgcggccgcgacaccgaaaaggtccgccgggccctctgcgcaggcttcttccgcaac
gcagcgcgcaaggatccccaggagggctacaagaccctcatcgagggcactcccgtgtac
ctgcacccgagctccgcgctcttcggcaagcaggccgagtgggtcatttaccacgagctc
atcctcacgagcaaggagtacatgcactgcaccacgagcatcgagcccaagtggctcgtg
gaggcggctccgaccttcttcaaggtcgcgccgacggataagctgagcaagaggaagaag
gcggagaggatccagccgctgtataataaatttgctaccgaggatgattggaggttgagt
gcgcagaggaagggcggaagaggaggtggtggtggtggtacttggggttaa
DBGET
integrated database retrieval system
