Frankliniella occidentalis (western flower thrips): 113202652
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Entry
113202652 CDS
T07591
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03022
Basal transcription factors
foc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113202652
09124 Replication and repair
03420 Nucleotide excision repair
113202652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
foc03021
]
113202652
03400 DNA repair and recombination proteins [BR:
foc03400
]
113202652
Transcription machinery [BR:
foc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113202652
DNA repair and recombination proteins [BR:
foc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113202652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
113202652
NCBI-ProteinID:
XP_026272780
UniProt:
A0A6J1S0P4
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MGGLHGVSTRRAAVTLAAGSGGRAFGIKCKCIVMADAGKASKQNQSKTFQCKNLHDYLKT
LPASTLDRLYNHPTTCLAVYRELPEIGRHYVIRILFVEQPVPQAVVASWLSQENSKEHNE
VTKVLKELQVWQEAPIPGGLPGWILNPIFKKNCRMALLGGGRANCIQSQLDADSKPRDIP
FLDQYATERWECVLHYMVGSQQQEGISADAVRLLLHARLMKRDEEDGSPVITREGFQFLL
MDTAQQVWHFILQYLDTVQEHNLDLVECLTFLFQLSFSTLGKDYSTQGMSEAMLKFLQHL
REFGLVYQRKRKGGRFYPTRLALNIAAGQTSAPGDIERVGYIVVETNYRVYAYTDSNLQV
ALVALFCEMMYRFPNLAVGILTRDSVRQALRSGITAEQMINFLRLHAHPRMVANGPPVLP
PTVVDQIKLWENERDRFNFSEGVLYSQFLSQQDFQVLRDHAQDQGVLIWQNERQRTMVVT
KGGHDDVKRFWKRYNRGND
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggctgcatggggtatcgacgcggcgggccgctgtgacgctagcagcgggctct
ggcgggagagctttcgggatcaaatgcaaatgtatagtaatggcggatgccggaaaagca
tctaaacagaaccaatcgaagacttttcagtgtaaaaacttgcacgactacttgaaaact
ttacctgcatcaactttggatagattgtacaatcatccaaccacatgtcttgcagtgtac
agagaattgccagaaatcggtcgacattatgtgataagaattttgtttgttgaacaacca
gttcctcaagcagttgttgcttcatggttgtcacaagaaaactccaaagaacacaatgag
gttaccaaagtcctcaaggaattgcaagtgtggcaagaggcacccataccgggtgggctt
cctggatggattctcaatccaattttcaagaagaactgccgcatggcactgttgggagga
gggagagccaattgcatccaatctcagcttgatgctgacagtaagccaagagacatcccg
tttttagatcagtatgctacagagcgatgggaatgtgttttgcactacatggtaggatcc
caacagcaggagggaatatcagcagatgctgtaagattactgctgcatgccagacttatg
aaacgagatgaggaagatggcagtccagttatcacaagagaaggatttcagtttcttctg
atggatactgcacaacaagtttggcactttattttgcagtatcttgatactgtacaagaa
cacaatctagatcttgtggaatgtcttacatttctcttccagttaagttttagtacactt
ggtaaggattatagcactcagggaatgagtgaagcaatgttgaaattcttacaacatctt
cgagaatttggattagtctaccaacgaaagaggaagggaggtagattttatcccactcgt
ttggctttaaatatagcagctggccaaactagtgcccctggggacatagagcgtgtggga
tacattgtagtagagactaactacagagtgtatgcttacacagactcaaatttgcaggtg
gctttagttgctctgttctgtgagatgatgtacaggttcccaaacttagctgttggtatt
ctaactagagattcagtgcgacaagctctgagaagtggaatcacagcagaacaaatgatt
aatttcttgaggctgcatgcacatcctcgcatggtggcaaatgggcccccagtattaccc
cccactgttgttgatcagatcaaattgtgggaaaatgagcgtgatagatttaacttttca
gagggagttttatatagccagttcctatcgcaacaagatttccaggtacttcgagatcat
gctcaagaccaaggtgtactaatatggcaaaatgaacgacagagaacaatggttgtgacc
aaaggagggcatgatgatgtgaaaagattttggaaaagatacaacagaggaaacgattaa
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