Frankliniella occidentalis (western flower thrips): 113218165
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Entry
113218165 CDS
T07591
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
foc
Frankliniella occidentalis (western flower thrips)
Pathway
foc03013
Nucleocytoplasmic transport
foc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113218165
03015 mRNA surveillance pathway
113218165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113218165
03041 Spliceosome [BR:
foc03041
]
113218165
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113218165
Spliceosome [BR:
foc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
113218165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
113218165
NCBI-ProteinID:
XP_026294175
UniProt:
A0A6J1TRM8
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MMYTGTTAEQDNRFSDKEKKLLKQMKFSDSLTKRVDMSKVKLDSIKPWITKKLTEILKLE
DDVVVEFVFNQLEAKFPDPKKMQINLTGFLNGKNARLFMQELWDLLLSAQDSVTGIPSQF
LEQKKEEIKKRMEEQEKLHETLAKKLEKEKEEKKDRKRERSRSRSREKKRSRSRERHREK
EKEKDKDKDKDKDKKEKERRKDKDKDKDKSKEGDTKDVENDKTKENDQDEKKESATPSTT
ETSTETAQSNGDADQSKSSKDDAEQTTGNGDATATTSATNTTTTTTAATTTRPGRWDSTE
VVIKKEPKDDEEEQSKDKRSRSRSSSASSRSSRKDKETSSKKERRSSRSTSYSSDDSRKG
KHSGKDADFEIRKKEDSVQKKRHYRSNNRDSSGSDSDRGRSSRKEHRGRSGSPQRSRRRD
DDRDRDRDRERDRRDRDRDRERERERERERDRRRRSMERERERERERERARRERERERDR
ERDRDRERERMRLSGRRRSPGRRSPRRSSPYRSGSRRSPRRDSPRRSPRRSPRRSSPRRS
PRRTDSPRHRSASKHSPSPRRSISDSRQAASRPQDSKKRKQSVSPSPNNADKKPPVEDSR
SQSRTPSPNKRDKENKEAKNKRRSKSSDSGDESPAVNTSPTKKSQERTSSRSKSPDQPKT
TRRSRSKSHSRSRSRDSSHSRSGSDSRAQTKKSDTAPVKADSAIEQKDEKKEKGLTSASE
TTPSSKPGRKKSESRSPSPKRKKLDSSKEEIHSSDSENSQDEKKDKKKVKESSPDVTEKS
KKKRKKKKKVGSSSESEESDAEASGKKKKKEKKHKKHKKHKKTKKAKKQKSDASDESAES
ENERGESLERRLRERALKSMKREENSETANDT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacggggacaactgctgagcaagacaaccgcttcagtgacaaagaaaagaaa
cttctgaagcaaatgaaatttagtgacagtttaactaaaagggtggacatgtccaaagta
aaactggattcaatcaaaccatggatcaccaagaagctgactgagattttaaagcttgaa
gacgatgtggttgtggagtttgttttcaaccagcttgaagcaaagtttccggatccaaag
aagatgcagattaatttgactggatttcttaacggaaagaatgctcgactttttatgcaa
gaactttgggatctacttctgtcagctcaagattctgtaaccggcattccaagtcagttc
cttgaacagaaaaaagaagaaattaaaaaacgcatggaagaacaagaaaagttgcatgaa
acacttgccaagaaattggaaaaggaaaaggaggaaaagaaagacaggaaaagagagcgc
agccgtagccgaagtcgagagaagaagaggagcagatctcgtgaacgtcaccgagagaaa
gaaaaggagaaagataaggacaaggataaagacaaggataagaaggaaaaagaacgtcgt
aaagacaaggacaaggacaaagataaatctaaagagggtgacactaaggatgtggaaaat
gacaagactaaggagaatgaccaggatgaaaagaaagagtcagccactccatctaccaca
gagacatccacagaaacagctcaaagcaatggtgatgcggatcagagtaaatcatcaaaa
gatgatgcagagcagactacaggcaatggagatgccactgcaacaactagtgccactaac
accaccaccaccaccactgccgccaccaccacccgcccaggaagatgggatagtactgaa
gttgtcataaaaaaagagccaaaggatgatgaagaggaacaatccaaggacaaaagatcc
cgctctcgaagttcatctgcatcctctcgttcatcacgcaaagacaaagagacttcttct
aagaaagaacgacgttcatcacggtctactagctacagctctgatgattcccgtaaagga
aagcattcagggaaagatgcagactttgaaatccggaaaaaggaggatagtgtacaaaag
aaaaggcattaccgctcaaacaatagagactcttcaggttctgattcagataggggccgt
tcgtctcgtaaagaacatcgaggcagatctggttctcctcaaagatcccgacgcagggat
gacgatagagatagggatagggacagggaaagggatcggcgggaccgagaccgagaccgt
gagagggaacgggaacgtgaaagagagagagaccgccggcgtcgttccatggagcgggag
agggaacgggaaagggagcgagaaagggcaagaagagagcgagagcgggagagggacaga
gaaagggaccgcgatcgagaaagggagagaatgagactgtctggcaggagaaggagtcca
ggaaggaggagtcccagacgtagtagtccatacagatcaggctctcggagaagtcctcgg
cgagacagccctcgccgttcaccacggcgcagcccaagacgtagcagtcccaggcgtagc
ccgcgtagaacggatagccctcgccacagaagtgcatcaaagcactctccatcacctcga
agaagcatatccgattctaggcaagcagcatcacgcccacaagatagcaagaaaagaaag
caatctgtatcacctagccctaacaatgcagataagaaaccacctgtggaggattctcgc
agtcagtcaagaacaccatctccaaacaaaagagataaagaaaacaaagaagccaaaaat
aaacggagatcaaagtcctctgattcaggtgacgaaagtcctgctgtaaatacatcgcca
accaaaaaatctcaagagcggacaagttcacgatcaaaatcacctgaccaaccaaaaact
actaggcgttcaaggtctaagtcgcactcccgctctcgctcaagagattcctctcattct
agatcaggatcagattctagggcacaaacaaagaaatctgatactgctcctgtcaaggct
gattctgcaattgagcagaaagatgaaaagaaagaaaaaggcttaacctctgcatctgaa
actactcccagtagcaagccaggtcggaagaaaagtgaatctcgatctccttcacctaaa
cgaaagaaattggacagttctaaggaagagattcattcatctgactctgaaaattctcaa
gatgaaaagaaggataaaaagaaagtcaaagaatcaagtccagatgttactgaaaagtcc
aagaagaaaaggaaaaagaagaagaaggttggctcaagcagtgaatcggaagagagtgat
gcagaagcaagtggtaaaaagaagaagaaggaaaagaaacataaaaagcacaagaaacac
aaaaagactaaaaaggctaaaaagcaaaaatctgatgctagtgatgagtccgctgagagt
gagaatgaaaggggggagtcattggaaaggcggttaagagagcgtgcacttaaatcaatg
aaaagagaggaaaacagtgaaactgcaaatgatacctaa
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