Flavobacterium oreochromis: JJC03_16750
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Entry
JJC03_16750 CDS
T08111
Name
(GenBank) endo alpha-1,4 polygalactosaminidase
KO
K01884
cysteinyl-tRNA synthetase, unknown class [EC:
6.1.1.16
]
Organism
foe
Flavobacterium oreochromis
Pathway
foe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
foe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JJC03_16750
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
foe01007
]
JJC03_16750
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
foe03016
]
JJC03_16750
Enzymes [BR:
foe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
JJC03_16750
Amino acid related enzymes [BR:
foe01007
]
Aminoacyl-tRNA synthetase
Other
JJC03_16750
Transfer RNA biogenesis [BR:
foe03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JJC03_16750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_114
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
QYS86505
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Position
3484458..3485447
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AA seq
329 aa
AA seq
DB search
MKIKFLIIATVVLLSSCYNDNDDTISKSQESIESIDFKQKMREFVIGISQYSKTMNPNFY
VIPQNGIELVSTTGDLSGFPHSNYLDAIDANGQEDLFYSSENDNQATPSDRTEYLKKLLN
ISKNSGNKILIIDFCSTNTDISDSYSQNNNNNYTSFATTEIGLNSIPPTPINQENDSNVV
NIDNAKIFLYIINPTHYKSKSEFIAAVNKTNYDLIIMDLFFKGIPFTASEINQLKNKENG
GKRLVISYMSIGEAESYRYYWQSNWALNKPNWLDEENPEWKGNFKVKYWDQNWQNIIYGN
NNSYLKKILDANFDGVYLDMIDSFDYYTK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaatttttaatcattgcaacagtagtactattatcttcttgttataacgat
aatgacgatacaatctcaaaaagtcaggaatccattgaatccattgattttaaacaaaaa
atgagagaatttgtgattggtattagccaatattctaaaacaatgaatcctaacttttat
gtaattcctcaaaatggtattgaactagtctctacaacaggagatctttcaggatttcct
cattctaactatctagatgctattgatgctaatggacaagaagatctattctatagttca
gaaaatgataatcaagcgacacctagtgatcgaacagaatatttaaaaaaattacttaat
atttctaaaaattctggaaacaagattttaattattgatttctgctcaacaaatactgat
atttctgattcttattcacaaaataacaataataattatacttcttttgctacaactgaa
ataggtttaaactctatccctcctactccaataaaccaagaaaatgattcaaacgttgtt
aatatagataatgcaaaaatttttttatatattataaatcctacacattataaatctaaa
agtgaatttattgcagcagttaataaaacaaattacgatttaattataatggatttattt
ttcaaaggaattccctttactgcttccgaaattaatcaactaaaaaacaaagaaaatgga
ggcaaaagacttgttatttcatacatgtctattggagaagcagaaagctaccgctattat
tggcaatctaattgggctcttaataaacctaattggctagatgaagaaaatcctgaatgg
aaaggaaatttcaaagtaaaatattgggatcaaaattggcaaaatataatttacggaaat
aataactcttatctaaaaaagatattagatgctaattttgacggagtctatttagacatg
attgattcttttgattactatacaaaatag
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