Fusarium oxysporum: FOXG_02253
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Entry
FOXG_02253 CDS
T04882
Name
(RefSeq) polyadenylation factor subunit 2
KO
K15542
polyadenylation factor subunit 2
Organism
fox
Fusarium oxysporum
Pathway
fox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
FOXG_02253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_02253
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
FOXG_02253
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Nucleoporin_N
PROPPIN
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
28944462
NCBI-ProteinID:
XP_018235704
UniProt:
A0A0J9UE51
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Position
5:3672846..3677410
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AA seq
617 aa
AA seq
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MAYEPRGDHGGGQGQDGAFVKVRGRRPVTDYGATITHWQHDRAPSYKGGYTGEAERPSVS
YIVDMLPPAARVTKAADSIPIKHLHSSLNKIKHPINVVRWTPEGRRLLTASTSGEFTLWN
GTGFNFETIMQAHDSAIRALEYSHSDDWLISADHDGVIKYWQPNFNNVQSINAHTDPIRD
LAFSPSDSKFVTASDDSTLKIFDFALGQMESKLEGHGWDAKSVDWHPTKGLLVSGSKDHL
VKLWDPRTSRCLTTLHGHKSTITKVLFEKVRGACLATSARDQTARVFDLRMMRDICLLKG
HEKDISTLTWHPIHPNLLSTGGMDGSLFHYLLDSPNPPPGQSFTVAPYDSPEPSSVAAQS
VWPMHKVPFAHDYAIWSLDWHPLGHILASGSNDRITRFWSRARPGDTDVFQDRYHIGEAA
AEAQGTWDRRGNRRQRQEEEQQEMEDEMDALVDQDAPRAAVPGLPGIPGLPLGGGLPGLG
SSIPLPPIPGVGAGSGAPPPPLPFPLPGLNGGPPPPPLPGLDPNNPPDPAQLLELMKKAG
VPLPPPGALPPGALPPGLIPPPGSMPPPPGSFAMPVPPPPMPGFDADKADARRRAPLPSQ
EESLRHEQRQGKYTRAR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgagcctcgtggtgatcatggtggtggccagggccaagatggggcatttgtg
aaggttcgaggcaggcgacctgtgactgactatggtgctactataacacactggcaacat
gatcgtgcccctagctataagggaggatatactggcgaagctgagcgacctagtgttagc
tatatcgttgatatgcttccacctgcagcgcgtgtcacaaaagctgccgacagtatccct
attaagcaccttcactcttctcttaacaaaatcaagcaccccatcaatgtggtgcgttgg
acaccagaaggtcgaagattattaacagcgtcgaccagtggcgagttcacactatggaac
ggaacaggcttcaatttcgaaaccatcatgcaggctcacgattccgccattcgtgccctg
gaatactcacatagtgacgactggcttatctcggcggatcacgacggagttatcaagtac
tggcaaccaaacttcaacaatgtccagagcatcaacgcccacactgaccctattcgagac
cttgctttcagcccaagtgattccaaatttgtcactgcaagcgatgactcgaccctcaag
atctttgactttgctctgggacaaatggaatccaagcttgaaggtcacggatgggatgct
aaaagtgtggactggcatcctactaaaggattgctcgtatctggttctaaggaccacctt
gtcaagctttgggatcctcgtacgagccgttgtttaacgactctacacggccacaagagt
actattacaaaagtactgtttgaaaaggtccgtggggcttgcctcgcgacatctgcaaga
gatcagaccgctcgtgttttcgatcttcgcatgatgcgtgacatttgccttctcaaaggt
cacgagaaggatatttctactcttacatggcatcctatccatcctaatcttctcagcact
ggtggtatggacggctctctattccactacctactcgattcaccaaacccgcctcctggc
cagtccttcaccgttgctccttacgacagccctgaaccgtcatcagtagccgctcagtca
gtatggccaatgcacaaggtgccctttgctcatgattatgctatttggtctctcgactgg
catcctcttggacacatccttgcatcaggatccaatgaccgtattacgcgtttctggagc
cgtgctagacctggtgatacagatgttttccaggatcgctaccatatcggtgaagcagcg
gccgaggcccaaggaacctgggaccgccgtggtaaccgtcgtcagcgacaggaggaggaa
caacaagagatggaagacgagatggacgctcttgttgaccaagacgcaccgagagctgct
gtccccggactgcctggcattcctggactgcctcttggtggaggcctaccaggccttggc
tcaagtattccacttcctcctattcctggtgtcggtgccggctcaggtgctcctccacct
cctctgccattccccttacctggactcaacggtggtccaccgccaccccccttacctggc
ctggatcccaacaatcctccagatccagctcaactcctcgagctgatgaagaaggccggt
gtgcccctcccgccaccaggagccctacctccaggagccttaccccctgggcttatccca
ccaccgggaagcatgcctccgccgcccggaagctttgccatgccggtcccaccacctcct
atgcctggatttgacgccgacaaggcagacgcccgacggagagctcccctacccagtcaa
gaggagagcttgcgacacgaacagcgacaaggaaaatacacgagagcgagatag
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