Fusarium oxysporum: FOXG_11480
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Entry
FOXG_11480 CDS
T04882
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fox
Fusarium oxysporum
Pathway
fox03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FOXG_11480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fox03400
]
FOXG_11480
Enzymes [BR:
fox01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FOXG_11480
DNA repair and recombination proteins [BR:
fox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FOXG_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
LIG3_BRCT
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
28952883
NCBI-ProteinID:
XP_018249696
UniProt:
A0A0J9WQZ7
LinkDB
All DBs
Position
10:complement(1550893..1554648)
Genome browser
AA seq
984 aa
AA seq
DB search
MSQTDEAQHEDEIQYGIVGMTREELEEKFPNRPKNHSKTLIFSELFREVFNPLNENKKQN
AIGAGPRKGFRGVNKLSPHEQRRHIIERFITRWRKEVGPDFYPALRLILPDKDRDRGVYG
LKENTIGKLLVKLMKIDKNSEDGYNLLHWKLPGQTTASRLAGDFAGRCFEVISKRPMRTD
VGNMTIAEVNEQLDKLAASTGESENLRVFETFYNRMNSEELMWLIRIVLKQMKVGATEKT
FLDLWHPDGDALFSVSSSLRRVCWELHDPETRLEQEETGVALMQCFQPQLAQFQMPASFQ
KMIELLRPTEEDPEFWIEEKLDGERMQVHMVQDKSHPGGKRFCFWSRKAKDYTYLYGDGL
QDENSSLTRHLKNAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAALSEQKNKSDTDS
AGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAIKPVHRRLEIHSYDKATSADAIEPL
LREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVIIGGYYGSGKRG
GMLSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWIEWDQKNP
PSKYIELGGGELRQYERPDVWIRPKDSVVVSVKAASVGPSDQFARGFTLRFPRFRRLRLD
RTWDTALSLEEFQELKERVEEESKEKAMTVEDRKRRNPKRVKRELTIAGEDATVAEFKGE
MTNLFEGLDFCVLSEALRPYKKTKAQLEAIIKENGGTVLQRAVPGTNMVLIADKKVVKVA
SLIKGGAVDIICPKWIRDCLEQELGAFLLPFEPSHLFHATDALHRAAEDNTDQFGDSYAR
DLSIEELRELMQDMPKIEDGTQFDKNEFLQQLEEHGKDLGRLRSFTFRRCVVLFHAVEAG
DNKISRLKHLVKYGGGNVTDDTDDLSVTHVVIEGDDPMQVGEAADMVRKELSSRRLQPRL
VTGKWIDECWNESTLLDEEQFVIP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaactgatgaggcacagcatgaagacgagatccagtatggcatcgtgggcatg
acccgcgaagagctggaggaaaagtttccgaatcgcccaaagaatcactcaaagacgctc
atcttctcggaactgtttcgagaagtcttcaaccccctcaatgagaataagaagcagaat
gccatcggtgcaggccctagaaagggattccgtggtgtgaacaagctttctcctcatgaa
cagcgtagacacatcattgagcgcttcatcactcgatggcgcaaagaagttggtcctgat
ttctatcccgctttgcgtctgatcctgccagacaaagaccgtgaccgtggagtttacgga
ctcaaagaaaacaccattggaaagttgctcgttaagcttatgaaaatagacaaaaactcc
gaggatggctacaacctgttgcattggaagctaccaggtcagacgacagcgtcgcgcctg
gctggtgactttgcaggacgatgttttgaagtcatctcaaagcggccaatgcgcaccgat
gttgggaatatgaccattgcagaagtcaatgagcagcttgacaaactcgctgcttcaaca
ggagagtcagagaatctgcgcgtctttgagactttctacaatcgcatgaattcagaagag
ctcatgtggctcattcggatcgtcctcaagcagatgaaagtcggggccacggagaagact
ttccttgacttgtggcatccagacggagatgctctatttagtgtgtcctcaagtttaaga
cgtgtttgctgggagctgcatgacccagaaacccgccttgagcaggaggaaactggagtt
gctttgatgcaatgtttccaaccacagctcgcccaatttcagatgcctgcatcttttcaa
aaaatgatcgagcttcttcgaccaaccgaggaagaccccgaattctggatcgaggaaaag
ctggacggtgagcgtatgcaagtccatatggtccaagacaagagccacccgggcggcaaa
aggttctgtttttggtcacgaaaagccaaagattacacctatctctacggcgatggtctt
caagacgagaactcaagtctgaccagacatttgaaaaacgcatttgcatctggagtaaaa
aacttgatcctggacggcgaaatgatcacctgggatatgggtgttgacaagatagtgcct
tttggcaccctcaaaacagctgcgctttcggaacagaagaataagtctgatacagactca
gctgggcacaggccattgttccgcgtttttgatatcctttacctgaacaacaaaccccta
actcaatataccctgcgggatcgacatcgagctttggaaaaggctatcaagcctgttcat
cgccgacttgaaattcacagttacgacaaggcaacgagtgccgacgcaatcgagcctctt
ctccgtgaggtcgtcgctaatgcttctgaaggccttgtgctgaagaacccgcgatctatg
taccgcctcaacagtcgaaatgatgactggctcaaggtcaaacctgaatacatgtccgag
tttggcgagtccctcgactgtgtcattattggtggctactatggttcagggaaacgaggt
ggcatgttatcaagctttctgtgtggactgcgtgttacacagaatcatatccaagctggc
gccaaccccgagaaatgtttcagtttcttcaaagtcggtggcggtttccgtgcagaagac
tatgcggagattcggcatcgaacagaaggcaagtggattgagtgggatcagaagaatccg
ccatcaaagtacatcgaacttggaggaggagagcttagacagtatgagagaccggatgtc
tggattcggcctaaagactctgttgttgtttctgtgaaagcagccagtgttggaccttca
gatcaattcgcccgaggcttcacactaagattcccacgattcagacgactccgactggac
cgaacctgggatacagccctctcccttgaagagttccaggagttgaaggagcgagttgaa
gaagagtcaaaggagaaggcgatgacggttgaggacaggaagcggcgcaaccccaagcga
gtgaagagagagctgaccattgctggagaagacgcgactgtagctgagttcaagggagag
atgacaaaccttttcgagggactggacttctgcgtactttcagaagcgctccgaccttat
aaaaagaccaaggcccagcttgaggccatcatcaaggagaatggcggcacagtcttacaa
cgagccgtaccagggaccaacatggttctgatagccgacaagaaggtggtaaaggtggcg
agcctcattaaaggaggggccgttgacattatctgccccaaatggataagagattgtctt
gaacaggaattgggagcgtttcttttgccatttgaaccgtcgcatctgtttcacgccact
gatgcattacaccgagcggcagaagataacacagatcagtttggggacagctacgcgcgg
gatctttccatcgaagaactcagagagctaatgcaagacatgcctaagattgaggacggc
acgcaatttgacaagaatgagtttctccaacagcttgaggaacatgggaaagacttagga
cgattaaggagctttacctttcgacgttgtgtggtgctgtttcatgccgtggaagctggc
gacaacaagatttcgaggctaaagcaccttgtcaagtacggcgggggtaatgttacagat
gacaccgatgatctgtctgtgacacatgtggtgatcgaaggcgacgacccgatgcaagta
ggcgaggccgctgatatggtacgaaaagagctgagctcaaggcgcttgcaaccaagatta
gtgacagggaaatggattgacgagtgctggaacgagagcacattacttgacgaggagcag
tttgtaattccttga
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