Fusarium oxysporum: FOXG_15441
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Entry
FOXG_15441 CDS
T04882
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
fox
Fusarium oxysporum
Pathway
fox03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FOXG_15441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fox03021
]
FOXG_15441
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_15441
Transcription machinery [BR:
fox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
FOXG_15441
RNA polymerase I system
FOXG_15441
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
FOXG_15441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5_N
CTD
Spt5-NGN
KOW
Cornifin
Motif
Other DBs
NCBI-GeneID:
28956499
NCBI-ProteinID:
XP_018255425
UniProt:
A0A0J9W3D9
LinkDB
All DBs
Position
5:complement(752037..755713)
Genome browser
AA seq
1049 aa
AA seq
DB search
MSSHDPSRFDDSEDEEDFNPAPADMSDEEQDGDDKQIKRGSSPAPRDDDDDEDERPSKSR
HADDDDEEEEEEEEEDDNPKRRDDDEDEDDEEDDEDEDDVQQGHRRKRRKERGAAFFDIE
AEVDDEDEAEDDEMLGEEIGDFITNDHPDDMAETGIDDDRRHRELDRRREIDSSMDAEKQ
AEILRQRYGNRRSGKGFRDASVVPKRLLLPSVDDPSIWAVRCKEGKEREVVFSIMKRIEE
RAGTKDELAITAAFERGGPDSVMKGFVYVEARRQTDILKGLDSMLNVYPHSKMILVDIKD
MPELFRVSKTPTLEPGAWVRLRRPMKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRDDA
FSSVTADGKRKRPFGMAGPKPPQRLFSEVEARKRHPRHIQGNPTAGTWTYMGDEFENGFQ
VKDIKIQQLITTDVNPSLEEVTRFASGAEDGTENLDLKALAHSLKDSNALATYLPGDIVE
VYTGEQKGVVGKAMRVHSDVVSITVTEGDLVGQEIDVPIRSLRKRFKIGDHVKVIGGSKF
RDEVGMVVNIKDDQVTLLTDQTNSEVTVFSKDLREASDIGGQGSLGQYSLHDLVQLDPTT
VGCVVKVDRESLVVLDQFGDTRQVMPSQIANKLPKRKTAVAADRSGSEIRLEDVVKEYTG
QQRQGKIIHIHRSYVFLHTNDSKENAGVFVTKASMVNTVAAKGGRVAAASAGPDLTAMNP
ALKLHKNGTENKPVQQPRSFGRDKAIEQTVIIRKGAYKGLLGIVKDTTDTHARVELHTKS
KTITVPKDSLSFKNKLTGATIDIASRGGRGGYGGGAGRGGGGDRVPGWQGGSRTPMAGSN
SERVPAWGSRTPAAASGRTPAWKAPDMSGARTPAWADGSRTVNPYDGNRTAYGSGGRTPA
WQAGGRTPAPGDAFGAGSRTPAYGGGGDSWGSGSKTPAWGVSAPTPGASGNDSWGGSGAY
DAPTPGVGLGAPTPGALSAPTPGAYSAPTPAAISAPTPGASWQGGWGADSAPTPAAGAPT
PGYYGAPTPAAYAPPETPAATGPRYTDDD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccacgacccttcgcgcttcgacgattccgaagatgaggaagatttcaaccca
gcgcccgccgatatgtccgacgaggagcaagatggcgacgacaagcagataaagcgtgga
agcagtcctgcgcctcgcgatgatgacgatgacgaggatgagcgaccatcaaagtcgcga
cacgccgatgacgatgacgaggaggaagaagaagaagaggaagaggatgacaatcccaag
cgtcgcgatgatgacgaggacgaagatgatgaggaagacgacgaggacgaggacgatgtc
cagcagggccatcgcagaaagcgcagaaaggaacgaggagcagctttcttcgatatcgaa
gccgaagtcgatgatgaagacgaagccgaagatgacgaaatgctgggtgaagagataggc
gactttatcacaaacgatcacccagacgatatggctgaaactggtatcgatgatgaccga
cgacatcgtgagctcgatcgccgtcgcgagatagattccagcatggacgccgagaaacag
gcagagatcctgcgacagcgatatggtaatcgacgttctggcaaaggcttcagagatgca
tcggttgttcccaagcgactgctcctccctagtgtggacgatcctagcatttgggccgta
cgatgtaaagaaggcaaggagcgagaagttgttttctcgattatgaagcgcatcgaagag
agggctggcactaaggatgaactggccatcactgctgcgttcgaacgtggaggccctgac
tctgtcatgaagggatttgtctacgttgaggcccgacgtcaaaccgacattttgaaggga
ttggacagtatgctcaatgtgtatcctcactccaagatgatcttggttgatatcaaggat
atgcctgagctgttccgcgtttccaagacaccaactctggagcctggagcctgggttcgt
ctccgaagacctatgaagcacaatggcgatcttgctcaggtcattgatgttactgagaac
ggtctggaggctcgtgtccgtttcattcccagattggactatggtatgcgagacgatgcc
ttctcttcagtcaccgccgatggaaagcgaaagcgacctttcggtatggctggtcctaaa
ccaccgcagaggctcttcagcgaggttgaggcacgaaagcgccatcctcgacatatccag
ggtaaccctactgctggaacatggacctacatgggtgacgagttcgagaatggtttccag
gtcaaggatatcaagattcagcaacttattaccactgatgtcaatccctcacttgaggaa
gtcactcgattcgcctcaggcgctgaagatggaaccgagaaccttgatcttaaggctctg
gcccacagtctaaaggacagtaacgctctggctacgtacctacctggcgatattgtcgag
gtgtacactggcgagcagaagggtgttgtcggaaaggctatgcgagttcactccgatgtc
gtctcgattactgttactgagggtgatcttgttggccaggaaatcgatgttccgatccga
tctcttcgcaagcgcttcaagattggtgatcatgtcaaggtcattggtggcagcaagttc
cgcgacgaggtcggaatggttgtcaatatcaaggacgatcaagttactcttctgacagat
cagaccaattctgaagtcactgtattcagcaaagatttgcgtgaagctagtgatatcggt
ggtcaaggatcattgggccagtactctcttcacgatttggtgcaacttgatcccacgaca
gtgggatgcgttgtcaaggtagatcgcgagtcgcttgttgttcttgaccagttcggagac
actcgccaggttatgccatcgcagattgccaacaaacttccaaagcgaaagactgctgtt
gccgccgaccgaagtggctctgagattagactcgaagatgtcgtcaaggagtacacaggt
caacaacgacagggcaagattattcacatccatcgctcgtatgtcttcctacacaccaac
gacagcaaggagaacgctggtgtatttgttaccaaggccagcatggtcaacaccgttgcg
gccaagggaggtcgtgtcgctgctgcatccgctggtcctgacctgacagcgatgaaccca
gcactcaagcttcacaagaacggtacagaaaacaagccagtacagcaacccagatcattt
ggccgagataaggcaattgaacagactgttattatcaggaagggagcctacaaaggtctt
ttgggtattgtcaaggatacaacagatacccacgcccgggtcgagcttcatacgaagagc
aagactattacagtgcccaaggatagtctgagctttaagaacaagttgactggagctaca
attgacatcgctagccgaggaggccgtggtggatatggtggtggtgctgggcggggaggt
ggtggtgatcgtgtgccaggatggcagggcggttctcgcacacctatggcgggtagtaac
tcagaaagagtgcctgcttggggatcacgaacacctgcagcagcaagtggacgcacaccc
gcttggaaggccccagatatgtccggagcccgaactcccgcatgggctgatggttcacga
actgtcaacccttacgacggcaaccgtactgcttatggctctggaggacgtacacctgcc
tggcaggccggtggaaggactcctgctcctggcgatgctttcggtgctggctcacgtacg
cctgcatatggcggtggtggtgacagctggggttcaggatccaagactcccgcttgggga
gtatctgcgccaactcctggagctagtggaaacgactcatggggaggttcaggcgcttac
gacgcccctacgcccggtgttggtcttggtgccccgactcctggtgcattgagtgctcct
acacctggtgcctactctgcaccgactcccgcggccatcagcgcacctacaccaggagct
tcgtggcaaggtggatggggagcagactcggctcctactcctgcggctggtgctcctacg
cctggttattatggtgctcctacacccgcagcatatgcccctccagagactcctgccgcc
actggtcctcgatacactgatgacgattga
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