Flavobacterium psychrophilum 950106-1/1: IB65_06135
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Entry
IB65_06135 CDS
T03412
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
fpq
Flavobacterium psychrophilum 950106-1/1
Pathway
fpq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IB65_06135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpq03400
]
IB65_06135
DNA repair and recombination proteins [BR:
fpq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IB65_06135
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IB65_06135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
HHH_5
RecR_C
HHH
Motif
Other DBs
NCBI-ProteinID:
AIT65463
UniProt:
A0A075RXQ8
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Position
complement(1347907..1348527)
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AA seq
206 aa
AA seq
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MEFSSKLLEKAVNEMAQLPGIGKRTALRLVLYLLKQPKDRTDFLAQSLLTMREGIIFCEN
CHNISDVAVCEICSNKNRNHQIVCVVEDVRDVMAIENTGQFRGVYHVLGGKISPIDGVGP
SQLNISSLVEKVKSGSVSEIIFALSSTMEGDTTNFYIYKQIKDCEIITSSIARGISVGDE
LEYADEVTLGRSILNRIPFENSFKNN
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggaattttcatcaaaactattagaaaaagcggtaaacgaaatggctcaattaccagga
attggaaaacgaacggctttacggttagtattgtatttgctaaaacaacccaaagatcga
acagattttttggcacaatctttacttactatgcgtgagggaattatattttgtgaaaat
tgccacaatatttccgatgttgcagtatgcgaaatttgttcaaataagaatagaaaccat
caaattgtttgtgttgtagaagatgttcgtgatgtaatggcaattgaaaatacaggtcag
tttcgaggtgtttatcacgttcttggtggaaaaatttcacccatagatggcgttggtcca
agtcagttaaacatatcgtccttagtagaaaaagtaaaatcaggaagtgtttcggagata
atttttgcactaagttcaacaatggaaggcgatacaactaatttttatatttataagcaa
ataaaagattgtgagataattacctcatctattgctcgtggaatatcagtgggagatgag
ttagaatatgcagatgaagtaactcttggacgaagtattttaaacagaattcctttcgag
aattcttttaaaaataattaa
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