Faecalibacterium prausnitzii L2-6: FP2_16020
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Entry
FP2_16020 CDS
T02591
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
fpr
Faecalibacterium prausnitzii L2-6
Pathway
fpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FP2_16020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpr03019
]
FP2_16020
Messenger RNA biogenesis [BR:
fpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FP2_16020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
CBK99073
UniProt:
D4JYH4
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All DBs
Position
1594126..1595913
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AA seq
595 aa
AA seq
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MAQTKEQNHAPAAANASGEKRPRTSRRPHYTRRPRRPQQPKEAATPIHIYPLGGLGEVGK
NMTVYECCGDMIIVDCGLVFPDNDMFGVDMVIPDFTFVVQNKDKIKGLLITHGHEDHIGS
IPYLLQKFDLPIYGTRLTCGLIRNKLEEFGLAGKTKFVEITPRQKLKLGCFTVEPIHVNH
SIPDAVAFAIDSPAGTIIQTGDFKIDYTPLACGPTDLATLSEYGQKGVLALLSDSTNAER
PGFTATEQKVAAGVRSLFARAQNKRIIIATFASNIYRVQQIIDLAVEDGRKVAFSGRSMV
NNTAMAQELGYMHIPEGTLISIDEINQYPPEQVVLVTTGSQGEPLSALSRMASCSHRQVR
VGPGDFIIISAKPIPGNEKSVTKIVNGLLLLGAEVIYEGMYDVHVSGHACQEEQKLMLTL
TRPKYFLPVHGEYKQLKKHAITAASLGIPTSNILIAENGSNIILSQDEMKLGEPVTAGAV
MVDGLGVGDVGNVVLRDRKHLSEDGLVIIVATVDSKTGKVLAGPDLVSRGFVYVRENESL
MDGAQSIVETALDRCVDEHVRDWNSVKTRVREALSSYIYRRTKRSPMILPILMEV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacaaaagaacagaaccacgctcccgctgcggccaatgcgtccggcgaaaag
cgcccccgcacttcccgccgcccccactacacccgccggccccgccgcccccagcagccc
aaagaggctgcaacgcccatccatatctatccgctgggcggcctcggcgaagtgggcaag
aacatgacggtctacgagtgctgcggcgatatgatcatcgtggactgcggcctcgtcttc
ccggataacgatatgttcggcgtcgatatggtcattcctgacttcacctttgtggtgcag
aataaggataagatcaagggcctgctcatcacccacggccatgaggaccacatcggcagc
atcccctacctgctgcagaagttcgatctgcccatctacggcacccgtctgacctgcggc
ctcatccgcaataagctggaagagttcggccttgcaggcaagaccaagttcgtggagatc
accccccgccagaagctcaagctgggctgcttcaccgtggagcccatccatgtgaaccac
tccatcccggacgcggtggctttcgccatcgacagcccggccggcaccatcatccagacc
ggcgacttcaagatcgactacaccccgctggcctgcggccccaccgaccttgctactctg
tctgagtacggccagaagggcgtgctggctctgctgagcgactccaccaacgcggagcgt
cccggcttcaccgccaccgagcagaaggtggccgccggtgtccgcagcctgtttgcccgg
gcgcagaacaagcgcatcatcattgcgaccttcgcgtccaacatctaccgtgtccagcag
atcatcgacctcgccgtggaggatggccgcaaggtggccttcagcggccgcagcatggtc
aacaataccgccatggcccaggagctgggctatatgcacatcccggaaggcaccctcatc
agcattgatgagataaaccagtatccgccggaacaggtggtgctggtgaccaccggcagt
cagggcgagcctctgagcgccctgagccggatggcttcctgcagccaccgtcaggtgcgc
gtcggccccggcgacttcatcatcatctcggccaagcccatccccggcaacgagaagagt
gtgaccaagatcgtcaacggtctgctcctgctgggcgcagaggtcatctatgagggcatg
tacgacgtccacgtctccggccacgcctgtcaggaagagcagaagctgatgctcaccctg
accagacccaagtatttcctgcccgtccacggcgaatataagcagctgaaaaagcacgcc
atcacggcggcaagcctcggcatccccaccagcaacatcctcattgccgagaacggctcc
aacatcatcctcagccaggacgagatgaagctgggcgagccggtgacggcgggcgctgtc
atggtggacggcctcggcgtgggcgatgtgggcaacgtcgtcctgcgggaccgcaagcat
ctgtctgaggacggcctcgtcatcatcgtggccaccgtggacagcaagaccggcaaagtt
ctggccggccccgacctcgtgagccgcggcttcgtctatgtgcgggagaacgagagcctg
atggacggcgcccagagcatcgtggagacggctcttgaccgctgcgtggacgagcacgtc
cgcgactggaacagcgtcaagacccgggtgcgcgaggccctgagcagctatatctaccgc
cgcaccaagcgcagccccatgatcctccccatcctgatggaggtctga
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