Fusarium pseudograminearum: FPSE_00173
Help
Entry
FPSE_00173 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FPSE_00173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_00173
Enzymes [BR:
fpu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FPSE_00173
DNA repair and recombination proteins [BR:
fpu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FPSE_00173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT_2
DNA_ligase_A_C
BRCT
DNA_ligase_IV
LIG3_BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
20358793
NCBI-ProteinID:
XP_009251568
UniProt:
K3VVC9
LinkDB
All DBs
Position
2:7126955..7129961
Genome browser
AA seq
984 aa
AA seq
DB search
MSQNDDAQHEDDIQYASMGVTREELEEKYPNRPKNHSKTLVFSELFREVFNPLNENKKQN
AAGSGPKNSFRGVNKLSPHEQRRHIIDRFITRWRKEVGFDFYPALRLILPDKDRDRGVYG
LKENAIGKLLVKLMKIDKNSEDGYNLLHWKLPGQTMASRLAGDFAGRCFEVISKRPMRTQ
VGNMTIAEVNEQLDKLAASSGEMENLRVFEIFYHRMNSEELMWLIRIVLKQMKVGATEKT
FLDLWHPDGDALFSVSSSLKRVCWELWNPEIRLEQGETGVALMQCFQPQLAQFQMPASFQ
KMIQLLRPTEEDPEFWIEEKLDGERMQVHMVQDKSHPGGRKFCFWSRKAKDYTYLYGDGL
QDETSSLTRHLKDAFTSGVKNLILDGEMITWDMGVDKIVPFGTLKTAAISEQQNKSGTDS
VGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAIKPVHRRLEIHEYTSATSADAIEPL
LREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVIIAGYYGTGKRG
GALSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWIEWDQRNP
PSEYIELGGGEARQFERPDVWIRPKDSVVVSVKAASVGPSDSFALGFTLRFPRFRRLRLD
RSWNTALSLEEFQELKQRVDEESKEKAMTVEDRKRHNPKRVKRELTIAGEDTNVAEFIGE
TTKLFEGLEFCVLSEALRPYKKTKTQLETIIKENGGVISQRAAPGTNMVLIADKKVVKVA
SLVKGGDVNIIRPKWIRDCLEQELGAFLLPFEDTHLFHATDALKRAANENTDQFGDSYIR
DLSIEELRQVMNDMPKIEDGIAFDKNEFLQQLEERGKDLGPLKSLTFRRCVVLFHAVEAG
DKRMSRLENLVRFGGGSVTDDANDLSVTHVVIQGDDPMQVGEAADMIRKELSLRPIQPRV
VTGAWIDECWKESTLLDEEQFAVP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaacgacgacgcacagcatgaagatgatatccaatatgcctccatgggagta
actcgtgaagagctggaagaaaagtatccaaatcgcccaaagaatcactcaaagacactc
gttttctctgagctgttccgagaagtcttcaacccgctcaatgaaaacaagaagcagaat
gccgcgggctcggggcctaaaaattcgtttcgtggagtgaacaagctctccccccacgaa
cagcgtcggcacatcattgaccgtttcatcacccgatggcgcaaagaagttggtttcgat
ttctatcctgcgttgcgcttgattctcccagataaggatcgcgaccgtggagtttatggc
ctcaaagagaacgcaattggaaaactactcgtcaagctcatgaagatcgacaaaaattct
gaagatggctacaaccttttgcactggaagttgcctggccagactatggcatctcgactg
gccggtgactttgctggacgttgcttcgaggtcatctcaaagagaccaatgcggacccag
gtcggcaacatgacgattgccgaagtgaacgagcagctggataagcttgcagcttccagc
ggagaaatggaaaatctacgtgtgttcgaaattttctaccatcgcatgaattccgaagag
cttatgtggcttattcgaatagtcctcaagcagatgaaagtcggtgccacggagaagact
ttcttagatctttggcatcccgatggtgacgccttgttcagcgtatcgtcgagcttgaag
cgtgtgtgctgggaactctggaatccggaaattcgtcttgaacagggtgagacaggcgtc
gctctaatgcaatgtttccagcctcagctggctcaatttcagatgcctgcgtcttttcaa
aaaatgattcaactccttcgaccgaccgaagaagaccccgagttttggatcgaagagaag
ctggacggtgagcgtatgcaagtgcatatggtccaggataagagtcacccgggtggcagg
aagttttgtttctggtcacgaaaggctaaagattacacatatctttacggtgacggtctc
caagacgaaacatcgagtcttactagacatctcaaggatgccttcacatccggcgtgaaa
aacttgatcttggacggcgagatgatcacttgggacatgggtgtcgacaagatagtgcct
tttggcaccctcaaaacagcagcaatttccgagcagcaaaacaagtcaggcacagattca
gtcggccaccgtcctctatttcgagtgtttgacatactctacctcaacaacaagcctctg
acacagtacaccctacgggaccgacatcgagctctggaaaaggcaataaaaccagttcat
cgccgactcgaaatccacgaatacaccagcgcaacgagtgctgatgctatcgaacctctt
cttcgcgaagtggttgctaacgcttccgaaggccttgttttgaagaacccacggtccatg
taccgcctcaacagccgaaacgacgactggctcaaagtgaagcctgaatacatgtccgag
tttggagagtcccttgactgtgtcattattgctggctactatggcacaggaaaaaggggc
ggcgctctatcaagtttcctgtgtgggctgcgtgtcacgcaaaaccatatacaagctggt
gcgaatcctgaaaagtgcttcagtttcttcaaagttggcggcggttttcgcgcagaggac
tatgcagaaatccggcatagaacggaaggcaaatggatcgaatgggatcaacggaaccca
ccgtcagagtatattgagctgggaggaggtgaggctaggcaatttgagcgcccggatgtt
tggattcggcccaaagattccgttgtggtctcggtcaaagccgccagtgttgggccttcc
gattcgtttgctctgggtttcactttgcgattcccacggttcaggcgtctgcgattggac
cggagctggaatactgctctgtcactcgaggaattccaagagttgaaacagcgtgtcgac
gaagaatcaaaggagaaggctatgacggttgaagacaggaagcggcacaaccccaaacga
gtcaagagggaactcaccattgctggagaggatacgaacgtggccgagtttataggagaa
acgacaaaactgttcgaaggcctggaattttgtgttctttctgaagcgctcaggccctac
aaaaagaccaaaactcagcttgagaccatcatcaaggagaatggcggcgtcatctcgcaa
cgagcagcacctggtacgaacatggtccttatcgccgacaagaaggtcgtcaaggtggca
agtcttgtgaaaggaggggacgtgaacatcatccgccccaaatggattagagattgcctc
gagcaggaattgggcgcgtttcttttgccatttgaggatacacatctattccacgcaact
gatgcgttgaaaagggcggcgaacgaaaacacagatcagttcggcgacagctacatacgc
gatctatctatcgaagagcttaggcaagtcatgaatgacatgccaaagatcgaggacggc
atagcctttgacaagaatgaattcctgcaacagcttgaggaacgtggaaaagacctgggg
cccttgaagagcctcacctttcggcgttgcgtggtgctattccatgctgtggaagctggc
gataaaaggatgtcaaggctagagaatcttgtcaggtttggcggaggaagtgtcacagat
gacgcaaacgacttatccgtgactcatgtggtgatacaaggcgacgacccgatgcaggtt
ggcgaggcagctgatatgatacgtaaggagctgagcttaaggcctatacaaccgcgagtg
gtgacaggggcttggatcgacgagtgctggaaagagagcacgctacttgacgaagagcaa
ttcgcggtcccttaa
DBGET
integrated database retrieval system
