Fusarium pseudograminearum: FPSE_04222
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Entry
FPSE_04222 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_04222
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
FPSE_04222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
zf-CCCH_4
zf_CCCH_4
zf-CCCH
zf-CCCH_2
Torus
Motif
Other DBs
NCBI-GeneID:
20362840
NCBI-ProteinID:
XP_009255615
UniProt:
K3VLS1
LinkDB
All DBs
Position
3:complement(4243160..4245241)
Genome browser
AA seq
634 aa
AA seq
DB search
MVICKFFQQGNCKFGSRCRNEHINPNDQNQSSNRFGALGGGSNNNQSPAEKYNINADTIE
KDLTTEVPQWILSAYAPGRDAPEQLFGGFPREQSFEELRLHFMMGKAAGNEQQALNEAQE
LYANAQQQMQTALRDTRGAVEFLVSAENNHPNRHDVCREGTQGAPFGEFLVGKRPKSTIA
DPGAQSNAFGANNNNNASPFGGGASTGASAFGQPSALGAKPSAFGSPAFGQPSQPAQGGT
AFGQPSQPSAFGQPSQLGQSGSAFGQPAQPSAFGQPSQPASAFGQPSALGAKPSAFGTPA
FGQPSQPSAGGSVFGQPSQPNAGGSVFGQPSQPNAQGSAFGQASQLNAGGSAFGQASQLG
AKPNPFGAPSGTNNNSSPFGNAANTNAPAANPFGAPSAGTANNKNASPFGANNNQSNAGA
SPFGKPSQPAQGTSPFGQPSNAPAASNPFGASNATPNQNTNNPFGQPSQPQANGFAPQNN
QPQANNPFGKPAQPAANPFGQPSNTTQSSSNPFASQPPTSAAASGNPYPPNSSRQHPPVE
SYSSKGADGRLSMFKGKSVMYKDGRPGIREFDGSWRRIWFPDGPPGYSADTELPSEKYDD
KTKAQWMAFAQTGTFQGGLMPELPPPREFTLWDF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggtcatctgcaaattcttccagcagggaaactgcaagtttggcagtcggtgtcgtaac
gagcacatcaacccaaacgatcagaaccaatcttcaaaccgctttggagctctgggagga
ggcagcaacaacaaccagagcccagctgaaaaatataatataaacgccgataccatcgaa
aaagatttgacgaccgaggtaccgcaatggatcctatcagcctatgcgccagggagagac
gctcctgagcagctctttggcggcttcccacgcgaacagagttttgaggagcttcgacta
cactttatgatgggcaaagctgcaggaaacgagcaacaggctttgaacgaagcgcaagag
ctgtacgcgaacgcgcaacaacaaatgcaaactgccctccgcgatacaagaggggctgtg
gaatttctagtcagcgccgagaacaaccaccccaatcgacacgatgtttgcagggaagga
acccagggagctccttttggagaattccttgttggaaaacgaccgaaatctaccatcgcc
gaccctggagcccagtcgaatgcattcggagcgaacaacaacaacaatgcatccccattt
ggcggcggcgcatcgaccggcgcaagtgcttttggacagccctcagctctaggcgcgaaa
ccaagcgcttttggatctccagcattcggtcaaccgtcacagccagctcagggaggcacg
gctttcgggcagccttcacagccatcagcttttggacaaccctcgcaactggggcagtct
gggtcagcttttggacagcccgctcaaccctcggcttttggtcagccatctcagccagct
tcagcctttggccaaccttcagcgctaggtgcgaagcccagcgcgtttggtacaccggcg
ttcgggcagccttctcagcccagtgcaggaggcagtgttttcggtcagccgtcgcaacca
aatgcaggaggtagcgtttttggccaaccatcacaaccgaacgcacagggtagtgcgttt
ggccaagcgtcacagcttaatgctgggggtagtgcttttggacaagccagccagcttggt
gcaaagccaaacccctttggagctccaagcggaacaaacaataattctagtccctttgga
aacgctgccaacactaatgctcctgcagcgaatccttttggtgctcccagtgctggtaca
gcgaacaacaagaatgccagcccgtttggagcgaacaataaccagagtaatgctggagcc
agtccatttggaaaaccttctcaacctgcacaagggacgtcgccatttggacagccatcg
aatgcaccagcagcgtctaatccgtttggtgcctccaatgctacgccgaaccaaaatacg
aacaacccttttggtcaaccctcacaacctcaggccaatggtttcgcaccacagaacaac
cagccgcaagctaacaatccatttggcaagccagcccagccagcagcaaatcccttcggc
caaccttcaaacactacacaatcctcctcgaacccattcgcgtcccaacctccgacatca
gccgctgcctcagggaacccatacccgcccaacagcagccggcagcacccgccagtcgaa
agctacagctccaagggcgcagatggacgactctccatgttcaaaggcaaatctgtcatg
tacaaggatggtaggcctggaattcgggaatttgatggatcatggcggcggatctggttc
ccggatggacctccaggatactcagcggatacagagttgccctctgagaagtacgatgac
aaaaccaaagcccaatggatggctttcgcacagacgggtaccttccagggcggtttgatg
ccagagctaccgccgccacgggaatttacattgtgggacttttaa
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