Frankia casuarinae: Francci3_1693
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Entry
Francci3_1693 CDS
T00320
Name
(GenBank) Type IV secretory pathway VirB4 components-like
Organism
fra
Frankia casuarinae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P-loop_TraG
AAA_10
DUF87
ABC_tran
AAA_29
dUTPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABD11069
RhizoBase:
Francci3_1693
UniProt:
Q2JCC3
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Position
2030717..2032606
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AA seq
629 aa
AA seq
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MSRRARRRTSAQAPSPSTRTVDAAAAAFVPDALTIAPRHLDVGGDYVATMAITGYPREVH
AGWLAPLVTYPGRVDVAVHVEPIDPVTAANRLRRQLSKLESGRQLGDEKGRLVDPQVEAA
TEDAYDLSARVARGEGKLFRLGLYFTVHAASEAELADEVAAVRALAASLLLDAKPVSYRS
LQGWVSTLPLGLDQVRMRRTFDTAALSAAFPFTSPDLPPADPTSLAPTGVLYGLNVASNG
LVHWDRFGDVDNHNAVILGRSGAGKSYLVKLELLRSLYRGIEVHVVDPEDEYARLAAAVG
ASYLHLGADEVRINPFDLPIQTTPDGRRTAPRDALVRRSLFLHTVIAVLVGQLSAAERAA
LDVAITATYQAAGISSDPRSWNRPAPLLADLATTLASSNDPAAVALGARLHPFTAGAFSG
LFNGPTTRRGDGHLVVYSLRDLADELKPIGTLLVLDAVWRRVSNPADRRPRLVVVDEAWL
LMRQPAGADFLFRMAKSSRKHWAGLTVATQDTADVLATDLGKAIVTNAATQILLRQAPQA
IDEITAIFDLSQGERQFLLSADRGQGLLAAGAQRVAFQALASQVEHRLVTTNPAELAADP
DNAADDGFLDLAVPDDPTDDNGQIYLDAA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacgagcccgacgccggacctccgcgcaggcccccagcccgtcgacccggaca
gtggacgctgccgcggcggcgttcgtcccggacgcactcacgatcgcgccccgccacctg
gacgtcggcggggattacgtggccacgatggcgatcaccggctatccgcgtgaggtccat
gccggctggctcgccccgctggtgacctacccgggccgggtcgacgtcgccgtgcacgtc
gagccgattgacccggtcaccgcggcgaaccggctgcgccggcagctgtcgaagctggag
tccggccggcagctcggcgacgagaagggccggctggtcgacccgcaggtcgaggcggcg
accgaggacgcctacgacctgtccgcccgcgtagcccgcggcgaaggcaagctgttcagg
ctgggtctgtatttcaccgtccatgcggccagcgaagccgagttggccgacgaggtcgcc
gccgtgcgggcgctggcggccagcctgctgctggacgccaagccagtcagctaccgctcg
ctccagggctgggtcagcaccctgcccctcggcttggaccaggtgcggatgcgccgcacc
ttcgacaccgcagccctgtccgcggcgttcccgttcacgtcgcccgatctgccgcccgcc
gacccgacctctctggctccgaccggggtgctctacgggctcaacgtcgcgagcaacggg
ctggtccactgggaccggttcggcgacgtcgacaaccacaacgccgtcatcctcggccgc
agcggcgccggcaagtcctacctggtcaagctcgaactcctgcgcagtctctaccggggc
atcgaggtccacgtcgtcgacccggaagacgaatacgcccggctcgccgccgcggtcggc
gccagctacctgcacctcggcgccgacgaggtgcggatcaacccgttcgacctgccgatc
cagaccacccccgacgggcggcgcaccgcaccgcgcgacgcgctggtgcggcgcagcctg
ttcctgcacaccgttatcgccgtcctggtcggccagctgagtgcggccgaacgggcagcc
ctcgacgtcgcgatcaccgccacctaccaggccgccgggatcagctccgacccgcgcagc
tggaaccggccggcaccgctgctggccgacctcgccaccaccctggccagctccaacgac
ccggccgcggtcgcgctcggcgcccggctgcacccgttcaccgccggggcgttctccggc
ctgttcaacgggccgacgacccgccgcggcgacggccaccttgtcgtctactcgctgcgc
gaccttgcggacgagttgaagccgatcgggacgctactcgtcctcgacgccgtgtggcgg
cgagtctccaaccccgccgaccgccgtccccgcttggtcgtagtcgacgaggcatggctg
ctcatgcgccagcccgctggcgcggacttcctgttccgcatggccaagtcgtcccgcaag
cactgggccgggctcaccgtggccacccaggacaccgccgacgtgctcgccaccgacctc
ggcaaagcgatcgtcaccaacgccgccacccagatcctgctccgccaggcaccgcaggcc
atcgacgagatcaccgccatcttcgacctgtcccagggcgaacggcagttcctgctgtcc
gccgaccgcggacaaggactcctcgcggcgggggcacaacgagtcgctttccaagccctg
gcctcgcaggtcgagcaccgcctggtcacgaccaacccagccgaactcgccgccgacccc
gacaacgcggccgacgacggcttcctcgatctcgccgtgccggacgacccgaccgatgac
aacggccagatctacctcgatgccgcctga
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