Frankia casuarinae: Francci3_2246
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Entry
Francci3_2246 CDS
T00320
Name
(GenBank) ATP-dependent transcriptional regulator, MalT-like, LuxR family
Organism
fra
Frankia casuarinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MalT
GerE
AAA_16
TPR_12
HTH_24
TPR_10
HTH_23
TPR_4
AAA_22
Sigma70_r4_2
TPR_2
TPR_19
ATPase_2
HTH_38
AAA_30
AAA_25
TPR_14
TPR_7
Crp
HTH_IclR
CENP-B_N
DUF2089
Motif
Other DBs
NCBI-ProteinID:
ABD11614
RhizoBase:
Francci3_2246
UniProt:
Q2JAS8
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All DBs
Position
2620630..2623374
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AA seq
914 aa
AA seq
DB search
MDTKARPTLAVSTKFQAPTYDTQLVGRDRLLDVLRDGRARRLALIHAPAGFGKTTLAVQW
QRVLRAEGVPVAWLSLDRDDNDAVWFLSHLIEAVRRVEPTLGGDLVEVLEGHSDDAQRYV
LTELVNQLAEHRRPLAIVLDDWHLIDAPQAVAALEFLLEAGPANLHLIVTSRTRSPAVGR
LKVRNQVTEIDATQLRFDHRESAAFLLELNELDLDSTDVHRLWSSTDGWVAALQLATLSL
RDSADPSALIRGFSGRHHSLGDYLAENVFDALPADLLDFLLTTSVCDRLCGDLAAAVSGQ
RRGQALLEELERRDLFLRPLDDNREWFRYHHLFVGYLRRRLERDHADRVVTLHRTASAWF
ADHGLLGEAVTHALAAGNDAGAVDLVERQAMHLVEHSRMAVLLSLVNKLPSALLPGRSRL
QIAIAWANCLLQRAQPAQVALDHVRAALTPDDTSDTGKDILGEADVVQACIDVYGDRIYR
AADLIAPYIAKNSGYRPWLVAVSSNIRTFVDIHTFAYDTAQARQRWANAFHDTTRGPFAG
VYGRCFAGLAAFAQLDLVTAERLYREAVALAREAAGPRSHAARLAGALLGRLYYERGDID
AAERLLEECHELGAESGVADLMIATYSTLARIKTLRGEIEDVWHLLDEGSEAASQLVLPR
LSAAVDHERLRLHLARGDLGRAQNVLARQSDDVARGGDGIAMATRHYQLAMRARVMAAQA
DYDGALRLLSQMHQESSSVAWRYAETATRIDLAVVHSLTGDTDTALRTLVPAVVAGARCG
LVRTVTDAGPELLKIIGELRDASRCRRWPVELPTVPSDYLSKLLATAHADAERAAIPIID
RPAERNPAPEEPLNAREIDILRLLDRGLSNKEIARNLGLTINTVKWYLKSIYTKLGVARR
GESVSEARRRRILA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaggcacgtcccacgctggccgtgtccacgaagtttcaggcacccacctat
gacacccagctggtcggccgggaccggcttctcgacgtgttgcgagatggccgggcccgg
cggctggctttgatccacgcgccggccgggttcgggaagaccacgctggcggtgcagtgg
cagcgggtgctgcgcgccgagggggtgccggtggcgtggctgagcctcgaccgggacgac
aacgacgcggtgtggttcctcagccatctcatcgaagcggtgcgccgggtcgaaccgacc
ctgggcggtgacctggtcgaggtgctggaggggcattccgacgacgcgcagcggtatgtg
ctcaccgagctggtcaaccagcttgccgagcatcggcggccattggcgatcgtgctcgac
gactggcatctcatcgacgccccgcaggctgttgccgcgttggagttcctgctggaagcg
ggtccggccaacctgcatctgatcgtcaccagccggacccggtcgccggccgtgggccgg
ttgaaggtgcgtaaccaggtgacggagatcgacgccacgcagctgcggttcgaccatcgg
gaatccgcggccttcctgcttgagctcaacgagttggatctcgacagcacggacgtgcat
cggctgtggtcgagtaccgatggctgggtcgccgcgttgcagctggcgaccctgtcgctg
cgtgacagcgccgacccgtcggcgttgatccgcggtttctccgggcggcatcactccctg
ggtgactatctcgccgagaacgtgttcgatgcgctgcccgcggatctgctcgacttcctg
ctcacgacttccgtctgtgatcggctctgcggtgatctggcggcggcggtgagtgggcag
cggcgggggcaggcgctgttggaggagctggaacggcgggacttgttcctgcggccgctc
gacgacaatcgggagtggtttcgctaccaccatctgttcgtgggttacctgcgccgccgc
ctggagcgtgatcatgcggatcgggtggtgaccctgcaccggaccgcgtcggcctggttc
gctgatcacggtctgctcggtgaggcggtcacccatgccctggccgccggtaacgacgcc
ggggcggtggacctggtggagcggcaggccatgcacctggtggagcacagccggatggcc
gtcctgctcagcctggtcaacaagttgccgtcggcgctgctgcccggccggtcgcggctg
cagatcgcgatcgcctgggccaactgtctgctgcaacgggcgcagcccgcgcaggtcgcg
ctcgaccacgtgcgtgccgccctgacacccgacgacaccagcgacaccggtaaggacatc
ctcggcgaggccgatgtcgtccaggcctgtatcgacgtctatggtgaccggatctaccgc
gccgctgacctgatcgccccctacattgcgaagaactccggctaccggccgtggctggtc
gcagtgtcgtccaacatccggaccttcgtcgacatccacaccttcgcctacgacaccgcg
caggcgcggcagcggtgggccaatgccttccacgacaccacccgcgggcctttcgccggc
gtgtacgggcgctgcttcgccggactcgcggcgttcgcccagcttgacctggtgaccgcc
gaacgcctgtaccgggaagccgtggccctcgcccgcgaagccgccgggccgcgctcgcac
gccgcccggctggccggcgcgctgctgggccggctgtactacgagcggggcgacatcgac
gccgccgagcggctgctggaggagtgccacgagctcggtgccgaaagcggcgtcgccgat
ctcatgatcgccacctactccacgctggcccgcatcaagaccctgcgcggtgagatcgag
gacgtctggcacctgctcgacgagggcagcgaggcggcgagccagctcgtcctgcctcgg
ttgtcggccgccgtcgatcacgaacgcctgcggctgcacctggcccgtggggacctcggg
cgcgcccagaacgtgctcgcccgccaaagcgacgacgtcgcccgcggcggcgacggcatc
gccatggccacccgccactaccagctcgcgatgcgcgcgcgggtcatggccgcccaggcc
gactacgacggtgccctgcggctgctgtcccagatgcaccaggagagcagctccgtggcc
tggcggtacgccgaaacggccacgcgtatcgacctcgcggtggtgcactcgctgaccggc
gacaccgacaccgcgctgcgcaccctcgtgcccgccgtcgtcgccggggcccgctgcggt
ctggtgcgcaccgttaccgacgccggcccggaactcctgaagatcattggcgagctgcgg
gacgcgagccggtgccgccggtggccggtggagttgcccaccgtgccctccgactacctg
tccaagctgctcgccacggcccacgcggacgcggaacgggcggcgatccccatcatcgat
cgcccggccgagcggaaccccgctcccgaagagccgctcaacgcccgcgagatcgacatc
ctccgtctgctggaccgcggactgtcgaacaaggaaatcgcgcgtaacctcggtctgacc
atcaacaccgtcaagtggtatctcaagagcatctacaccaagctcggggtcgctcggcgc
ggggaatcggtctcggaggcccgccggcgccggatcctggcctga
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