Frankia casuarinae: Francci3_3518
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Entry
Francci3_3518 CDS
T00320
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fra03016
]
Francci3_3518
Enzymes [BR:
fra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Francci3_3518
Transfer RNA biogenesis [BR:
fra03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Francci3_3518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ABD12871
RhizoBase:
Francci3_3518
UniProt:
Q2J771
LinkDB
All DBs
Position
complement(4201727..4203349)
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AA seq
540 aa
AA seq
DB search
MNGRSYEVRTFGCQMNVHDSERLCGLLESAGYSPVDPGGEADVVVFNTCAVRENADNRLY
GNLGQLVPVKKGHPGMQIAVGGCLAQKDRAAILDRAPWVDVVFGTHNLHRLPVLLERARH
NAAAQVEIAEALEVFPSSLPTRRASHHSAWVSISVGCDNTCTFCIVPSLRGRERDRRPGD
VLAEVEALVAEGALEITLLGQNVNSYGRSLGDPGAFAKLLAACGRVDGLERVRFTSPHPR
DFTDDVIEAMATTSNVCHQLHMPLQSGSDTVLRRMRRSYRRDRFLGIVERVRAAMPDAAI
TTDIIVGFPGETEADFADTLDVVRAARFSGAFTFQYSPRPGTPAATMDAQVDRATVADRY
TRLVALQDEISWAENRALVGRRVEVLVSEGEGRKDGATGRMSGRARDGRLVHFRADEAAS
SSTGSGPRAGGAAPAVAVAVAPTVRPGDVVETVVTRAAPHHLTADGPLRSHRATRAGDAW
ALGRDGDGGGAAAAQQPADGRPIVTLGIPSLRPSSPDPVGPASADAASAGADACCTPVRR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggccgcagctacgaggtccgcacgttcgggtgccagatgaacgtccacgactcc
gaacggctctgtgggctgctggaatccgccggctactccccggtcgatcccggcggcgag
gcggatgtggtcgtgttcaacacctgcgcggtgcgggagaacgccgacaaccgcctgtac
ggcaacctcggccagctagtcccggtgaagaagggccatccgggcatgcagatcgcggtc
gggggctgcctcgcccagaaggaccgggccgcgatcctcgaccgggcgccctgggttgac
gtggtcttcggcacgcacaacctgcaccgactgcccgtgctgctggagcgcgcgcggcac
aacgcggcggcccaggtcgagatcgccgaggccctggaggtcttcccgagctccctgccg
acccggcgggccagccatcactcggcctgggtcagcatcagcgtgggatgtgacaacacc
tgcaccttctgcatcgtccccagcctgcgtggccgcgagcgtgaccgccggccgggcgac
gtgctcgccgaggtcgaggccctggtcgcggagggcgccctggagatcacactgctggga
cagaacgtcaactcctacgggcgctcgctgggcgatcccggtgccttcgcgaagctgctg
gccgcctgcggtcgcgtcgacggtctcgaacgtgtccgattcacctcaccgcatccgcgc
gacttcaccgacgacgtcatcgaggccatggcgaccacctcgaacgtgtgccaccagctg
cacatgccgttgcagtccgggtcggacaccgtgctgcgccgcatgcgccgctcgtaccgt
cgggaccgtttcctcggcattgtcgagcgggtgcgggcggccatgcccgacgcggccatc
accaccgacatcatcgtcggcttccctggcgagaccgaggcggacttcgccgataccctc
gacgtggtgcgggcggcccggttctccggcgccttcaccttccagtactcgcctcgcccg
ggcaccccggcagcgaccatggacgcccaggtggaccgggcgaccgtggccgaccggtat
acccggctggtggccctgcaggacgagatctcctgggcggagaaccgggccctggtcggc
cggcgggtcgaggtgctggtctcggagggggaggggcgcaaggacggcgccaccggccgg
atgtccggccgggctcgggacggacggctcgtgcacttccgcgcggacgaggccgcgagc
tcgtccaccggctcgggcccgagggcgggcggcgccgcgcccgcggtcgcggtggcggtc
gcgcctacggtgcgcccgggcgacgtcgtcgagacggtggtgacgcgggcagcaccccat
cacctcaccgccgacggccccctgcggtcccaccgggcgacccgtgcgggggacgcgtgg
gcgctcgggcgtgacggtgacggtggcggtgcggcagccgcgcagcagccggcagacgga
cggccgatcgtcaccctgggcatcccgtccctgcggccgtcctcgcccgatcccgtcggc
ccggcgtcggccgacgcggcgtcggccggcgcggacgcctgctgtactccggtacgtcga
tga
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