Frankia casuarinae: Francci3_3880
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Entry
Francci3_3880 CDS
T00320
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
fra
Frankia casuarinae
Pathway
fra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Francci3_3880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fra03400
]
Francci3_3880
Enzymes [BR:
fra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Francci3_3880
DNA repair and recombination proteins [BR:
fra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Francci3_3880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABD13230
RhizoBase:
Francci3_3880
UniProt:
Q2J662
LinkDB
All DBs
Position
complement(4642121..4643371)
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AA seq
416 aa
AA seq
DB search
MGRGCGRGYGARVALTSSPEQPLPVRSVSRALGDWINRLGRVWVEGQVTGIVRRPGMGTV
FLTLRDPVADVSLRVTCPRAVCDAVGPALVDGARVVVWGKPSFHPGRGTLALAVVEIRPL
GAGALLARLEQLKATLAAEGLFAASRKRRPPFLPAAVGLITGRASAAERDVVENARRRWP
AVRIVLREVAVQGPLAVAQVIDALRELDARAEVEVIVIARGGGSLEDLLPFSDEALLRAV
VAACTPVVSAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVGEQAIAVAQLRARARRVV
EHRLDREERWLADTRGRPVLATPTRDVDRRADDVSALLARSRRCVRHVIDVTGNDLAATR
ARMRALSPAATLDRGYAVVQRTVDGAVVRGPAEVAAGDGLAIRVAGGTLRATVVDG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtggggcgtggttgtgggcgaggttacggtgcccgggtggcactgacatcgtccccggaa
cagccgctgccggtccgcagcgtgtcgcgcgcgctgggagactggatcaaccggctgggg
cgggtgtgggtcgaggggcaggtgaccgggatcgttcgccgtcccgggatgggaacggtc
ttcctcaccctgcgggacccggtcgccgacgtgtccctgcgggtcacctgcccgcgcgcg
gtgtgcgacgcggtggggccggcgctcgtcgacggggcccgcgtcgtggtgtggggcaag
ccgtcgttccaccccggccgaggcacgctggcccttgcggttgttgagattcgcccgctc
ggcgccggtgcgctgctggcccggctcgaacagctcaaggccacgctggcggccgagggg
ctgttcgccgcgtcccgtaagcggcgtcctccgttcctcccggcggccgtcggtctgatc
accgggcgggccagcgcggcggagcgggacgtggtcgagaacgcgcgccgtcgctggccg
gcggtgcgcatcgtgttacgagaggtggccgtccaggggcctctcgcggtcgcccaggtc
atcgacgcgctgcgggaactcgacgcgcgcgccgaggtggaagtgatcgtcatcgctcgt
ggcggcgggtcgctggaggatctgctgcccttctccgacgaggcgctgctgcgggctgtc
gtggccgcgtgtaccccggtggtgtcggcaatcggacacgagcaggacacccctttgctc
gatttcgtcgccgacgtccgcgcctccacgccgacggacgcggcgaagagggtggtgccg
gacgtcggtgagcaggcgatcgcggtcgcccagctgcgggcccgggcccggcgggtcgtc
gagcaccgactcgaccgggaggaacgttggctggcggacacccggggacgccccgtgctc
gcaacgcccacgcgcgacgtggaccgcagagcggacgacgtgtcggcgctcctcgcccgt
tcgcgccgctgcgtccgccacgtgatagatgtgaccgggaacgatctggccgccacccgc
gcccggatgcgcgcgctgtcgccggcggcgaccctcgaccgcgggtacgccgtggtgcag
cgcaccgtggatggtgcggttgtgcgcggacctgccgaggttgcggccggggacgggctc
gccatccgggtggcgggcggaacgctgcgcgcgacggtcgtggacggctga
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