Frankia sp. EAN1pec: Franean1_0884
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Entry
Franean1_0884 CDS
T00608
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
fre
Frankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fre03021
]
Franean1_0884
Transcription machinery [BR:
fre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Franean1_0884
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_AsnC-type
HTH_28
Xre-like-HTH
Sigma70_ECF
HTH_24
FXR_C1
TnsD
UBM
Motif
Other DBs
NCBI-ProteinID:
ABW10340
RhizoBase:
Franean1_0884
UniProt:
A8L2E7
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Position
1029278..1030195
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AA seq
305 aa
AA seq
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MSAAGFAAPWPARRVRSSRTDREAAVAAQELGAGSAVPDAAATPEVAGWVPPSWEDVVRE
HGNRVYRLAYRLTGNAHDAEDLTQDVFVRVFRSLADYTPGTFEGWLHRITTNLFLDRMRR
QQKIRFDALPEDTERLAGREASPEAVYAESHLDADVEAALAALPPDFRAAVVLCDIEQLS
YEEIAQTLGVKLGTVRSRISRGRAMLRAALADRAPRGMAMAGDDGVSSAAVGPATGPSPA
QAETSGSWERPPVGATSPGESQLAVDAAVAEPDRSGRRGRRTDRRRGPVSSAVGAEGGAP
RERRA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcagcgggattcgccgctccctggccggcgcgtcgggtacgttcgtcgcgaacc
gaccgagaggcggctgtggcggcgcaggagctcggggctggttcggccgtccccgacgcg
gccgccaccccagaagtagctggttgggtgcctccgtcctgggaggacgtggtcagggag
cacggcaaccgggtgtaccgccttgcctatcgcctgacgggcaacgcgcacgacgccgag
gacctcacccaggacgtcttcgtccgagtgttccgctcgctggccgactacacccccggc
accttcgaggggtggctgcaccgcatcacgaccaacctgttcctggaccggatgcgccgc
cagcagaagatcaggtttgacgccctgccggaggacaccgagcgcctggccggccgtgag
gcgagcccggaggccgtctacgccgagagccatctggacgccgacgtcgaggccgctctc
gccgcgctgccgccggacttccgtgccgcggtcgtgctgtgcgacatcgagcagctctcc
tacgaggagatcgcacagacgctcggggtcaagctcggcaccgtccgcagccggatctcc
cgggggcgggcgatgctgcgcgccgcgctcgccgaccgcgccccgcgcgggatggcgatg
gcgggcgacgacggagtctcgagcgccgcggtgggcccggccacggggccgtccccggcc
caggcggagaccagcggttcctgggaacggccgccggtgggtgccacgagtccgggtgag
agccagctcgcggtcgacgccgccgtggccgaaccggacaggtcggggcgccgtggtcgc
cggaccgaccgccgccgaggtccggtgagcagtgccgtcggagccgagggcggtgctcct
cgggagcggcgggcgtga
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