Parafrankia sp. EAN1pec: Franean1_1186
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Entry
Franean1_1186 CDS
T00608
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fre03016
]
Franean1_1186
Enzymes [BR:
fre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Franean1_1186
Transfer RNA biogenesis [BR:
fre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Franean1_1186
Prokaryotic type
Franean1_1186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABW10640
RhizoBase:
Franean1_1186
UniProt:
A8L6F8
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All DBs
Position
1410712..1411653
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AA seq
313 aa
AA seq
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MPSSERPTAAGRPTAAGRPTAAERPAAVDGLVVVDKPAGWTSHDVVARSRRLLGTRRIGH
AGTLDPMATGVLVLGVGRGTRLLGRLALTAKVYEATIRLGRTTTTDDAEGDPVADRPVDV
GAGPLAAAMAELTGEIDQVPSSVSAVKVAGVRAYDRVRAGEEVTLAPRRVTVGRFELLAR
RGETDLDVVVACSSGTYIRALARDLGAALGCGAHLTALRRTEVGPFGLAEAVTLDALAEA
ANAAVVPLGAAVAATFPRRDVDGEQARDVAYGRRLPMLGSPGPYGVFGPDGALLALFEER
DGVARPIVVFAPA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcttctgaacgtcccacggcggccggacgtcccacggcggccggacgtcccacg
gcggccgagcgtcccgcggccgtcgacggcctcgtcgtcgtggacaagcccgccggctgg
acgtcgcacgacgtcgtcgcgcggtcccggcgcctgctgggcacccgccgcatcggccac
gccggcaccctggacccgatggcgaccggtgtgctcgtgctcggcgtcggccgaggaacc
cgcctgctcggccgactggcgctgaccgccaaggtgtacgaggccacgatccggctcggc
cgcaccaccacgacggacgacgccgagggcgacccggtggcggaccgcccggtcgatgtc
ggcgccggcccgctcgcagcggcgatggcggagctgaccggggagatcgaccaggtcccg
tccagtgtcagcgcggtgaaggtcgccggggtgcgggcctacgaccgggtccgggccggc
gaggaggtgacgctcgcgccgcggcgggtcaccgtcggccggttcgagctgctcgcccgg
cgcggcgagaccgacctggacgtcgtcgtcgcctgctcgagcgggacgtacatccgcgcg
ctcgcccgggatctgggggccgcgctgggctgcggcgcccacctcaccgcgctgcggcgc
accgaggtcgggccgttcgggctggccgaggcggtgaccctcgacgcgctcgccgaggcc
gcgaacgcggccgtcgtgccgctgggggcagcggtggcggcgaccttcccgcgccgcgac
gtggacggggagcaggcccgggacgtcgcctacgggcggcggctgcccatgctcggcagc
ccggggccgtacggcgtgttcgggccggacggagcgctcctcgcgctgttcgaggaacgg
gacggcgtggcccgcccgatcgtcgtcttcgcgcccgcgtag
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