Pseudofrankia inefficax: FraEuI1c_5407
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Entry
FraEuI1c_5407 CDS
T01354
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00061
Fatty acid biosynthesis
fri00071
Fatty acid degradation
fri01100
Metabolic pathways
fri01212
Fatty acid metabolism
fri02024
Quorum sensing
Module
fri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FraEuI1c_5407
00071 Fatty acid degradation
FraEuI1c_5407
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_5407
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fri01004
]
FraEuI1c_5407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fri04147
]
FraEuI1c_5407
Enzymes [BR:
fri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FraEuI1c_5407
Lipid biosynthesis proteins [BR:
fri01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
FraEuI1c_5407
Exosome [BR:
fri04147
]
Exosomal proteins
Exosomal proteins of breast milk
FraEuI1c_5407
Exosomal proteins of breast cancer cells
FraEuI1c_5407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
FeoA
Motif
Other DBs
NCBI-ProteinID:
ADP83394
UniProt:
E3JAQ6
LinkDB
All DBs
Position
complement(6636406..6637845)
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AA seq
479 aa
AA seq
DB search
MAILVFEEQEYSLARLDALTGALAVRLADRGVRPGDRVALMSSTRPEFIIAVRAIWRLGA
AVVLLSPSWKRADVAHALAVSEPAHAIGDHPVLADLMPMVHLDEPLEGVDAGVSPVTPVP
APDPAADAVFVFSSGTTGLPKAVRHTHASFAAAVDDWRAVLGMTSADRIQVATPPSHILG
ILNIVTALETGAWMRLHRRFDLDTVLACIQDDRITIEMAVAPIALAIAAHPKLESFDLSS
LRYIMWGATPVTASVAQTVTRRAGVAWLPAYGASELPVIACNPLDGARLDSVGLAAPGVE
LRVVDLETGVPVPPGETGEIQARSPSLMIGYLPTEANADAFQDGWYRTGDVGTIDADGWV
RLTDRRKEMIKVRGFQVAPAEVETVLHGHPAVADCAVFGVPDPADGESIVAAVTVAGGAD
PAGLAEELVTLVGDRLASYKRPRRIVFVPEIPRLPSGKVLRRLLRDQVLDVAVDPPAPG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcctcgtcttcgaggagcaggagtacagcctggccaggctggatgccctgacc
ggcgccttggctgtcaggctcgcggaccgcggtgtccgccccggtgaccgcgtcgcgctg
atgtcgtcgacccggcccgagttcatcatcgcggttagggccatctggcgcctaggggcc
gccgtcgtcctgctcagcccctcctggaagcgcgctgacgtcgcgcacgccctggcggta
agcgagccggcgcatgccatcggtgaccatccagttctcgccgacctgatgccgatggtg
cacctggacgagcccctggagggtgtcgacgccggtgtttccccggtcacgccggttccc
gcgcccgacccggccgccgacgcggtgttcgtgttcagctccggcaccaccggcctgccc
aaggccgtccggcacacgcacgcctcgttcgccgccgccgtcgacgactggcgcgccgtg
ctcggcatgacgtcggccgaccggatccaggtcgccaccccgccgtcccacatcctaggg
atcctcaacatcgtcaccgcgctggagacgggcgcgtggatgcggctgcaccgccggttc
gacctggacacggtgctcgcctgcatccaggacgaccggatcaccatcgagatggccgtc
gcgccgatcgcgctcgcgatcgcggcgcacccgaagctggagtcgttcgacctgtcgtcg
ctgcgctacatcatgtggggcgcgacgcccgtgacggccagcgtcgcgcagaccgtgacc
cgccgcgccggggtggcgtggcttcccgcctacggggcgagcgagctgccggtcatcgcc
tgcaacccgctggacggcgccaggctcgacagcgtcggcctggccgcgcccggggtcgag
ctgcgggtcgtggacctggagaccggcgttcccgtcccgccgggggagaccggggagatt
caggcccgctcgccgtcgctgatgatcggctacctgccgacggaggccaacgcggacgcg
ttccaggacggctggtaccgcaccggtgacgtcgggaccatcgatgccgacggctgggtg
cggctcaccgaccggcgcaaggagatgatcaaggtgcgcggcttccaggtcgcgcccgcc
gaggtcgagacggtgctgcacggtcatccggcggtcgccgactgcgcggtgttcggggtc
cctgaccccgcggacggggagtcgatcgtcgccgcggtcaccgtcgcgggcggcgccgac
ccggccggcctggccgaggaactcgtcacgctggtcggtgaccggctcgcgtcctacaag
cggccgaggcggatcgtgttcgtccccgagatcccgcggctgccctccgggaaggtgctg
cgccgcctcctgcgcgaccaggtactggacgtcgcggtcgacccgccggcccccgggtga
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