Frondihabitans sucicola: GCM10025867_00990
Help
Entry
GCM10025867_00990 CDS
T09158
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
fsb
Frondihabitans sucicola
Pathway
fsb00061
Fatty acid biosynthesis
fsb00071
Fatty acid degradation
fsb01100
Metabolic pathways
fsb01212
Fatty acid metabolism
fsb02024
Quorum sensing
Module
fsb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GCM10025867_00990
00071 Fatty acid degradation
GCM10025867_00990
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10025867_00990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fsb01004
]
GCM10025867_00990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fsb04147
]
GCM10025867_00990
Enzymes [BR:
fsb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GCM10025867_00990
Lipid biosynthesis proteins [BR:
fsb01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
GCM10025867_00990
Exosome [BR:
fsb04147
]
Exosomal proteins
Exosomal proteins of breast milk
GCM10025867_00990
Exosomal proteins of breast cancer cells
GCM10025867_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BDZ47858
LinkDB
All DBs
Position
complement(95061..96515)
Genome browser
AA seq
484 aa
AA seq
DB search
MNRALPLFDWAFSQSDKACIVTDSETYTYGDMTEAIRTTAAALSSIVHRGTPVGLYIDST
PNFLVHQYAVFYLGGVVMPLNRSMKPNEIDDIVRNIGLEVVVADTHLELESAPALYEVSG
EFSSPPLTGAVPTMEQLDADDGAMILQTSGSTGRPKGVRLSLRNLAANYDATYRWMNVGN
HDRILLPLPIFNTYGLNQGINLMAMTGATLRLLRRFTPEGFQRALDDTSPTFIPMVPTMV
TRLFQAGVRYDEVATVGIGAAASPTQIAADAWAVFPNAFLIFGYGLTEGTAIASQNRVGT
FEHNTGEFASAGRIMPGVDVRLDDSTADDGRGEILIHGESVFSAYIGTEEARPVVDGWLH
TGDIGTFTDGRLSIVDRRRELIIRGGQNIYPGEVERLISAHPAVLEAAVVGAPDADLGEL
PVGFVVLRNGSKTSPDEIIEWLRPQAASFKIPAALTVLDSMPKTPTGKIRKLDLRDLVSG
GLTN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgccctcccgctcttcgactgggccttctcgcagtccgacaaagcgtgcatc
gtcaccgactcggagacctacacctacggcgacatgaccgaggccatccgaaccacggcg
gcggccctgtcgagcatcgtgcaccgcggcaccccggtcggcctctacatcgacagcacc
ccgaacttcctcgtccaccagtacgcggtgttctacctcggcggagtcgtcatgccgctc
aaccggtcgatgaagccgaacgagatcgacgacatcgtgcggaacatcgggctcgaggtc
gtcgtcgccgacacccacctcgagctggagtcggcgccggcgctctacgaggtgtcggga
gagttctcgagcccgcctctgaccggcgccgtaccgacgatggaacagctcgacgcggac
gacggcgcgatgatcctgcagacctcgggatcgaccggtcggcccaagggcgtccgtctt
tcgcttcgcaacctcgccgccaactacgacgcgacctatcgatggatgaacgtcggcaac
cacgaccgcatcctgctgcccctccccatcttcaacacttatgggctcaatcagggcatc
aacctgatggccatgaccggtgcgaccctgcgcctgctccgacggttcactcccgaaggg
ttccagagggcgctcgacgacacgtcgcccaccttcatcccgatggtgccgacgatggtg
acccggttgttccaggcgggggtgcgctacgacgaggtcgccacggtcggcatcggcgcg
gcggcgtcgccgacccagatcgctgccgatgcctgggcggtgttccccaacgcgttcctc
atcttcgggtacggactgaccgagggcacggccatcgcgtcgcagaaccgcgtcggaacg
ttcgagcacaacacgggcgagttcgcgtcggccggacgaatcatgccgggtgtcgacgtc
cgcctcgacgactcgacggccgacgacggccgcggcgagatcctcatccacggcgagtcc
gtcttctcggcctacatcggtaccgaggaggcccgtccggtcgtcgacggctggctgcac
accggcgacatcgggaccttcaccgacggtcgactcagcatcgtcgaccgcagacgcgag
ctcatcatccgcggcggtcagaacatctaccccggcgaggtggaacgactgatctcggcc
catcccgctgtcctcgaggcggccgtcgtcggcgcacccgacgcggatctcggcgagctg
ccggtgggcttcgtggtgctccggaacggttcgaagacgtcacccgacgagatcatcgag
tggctccggccgcaggcggcgtccttcaagatcccggcggctttgacggtgctcgactcc
atgccgaagacgcccaccgggaagatccgcaagctcgacctccgcgacctggtctccggc
gggctcacgaattga
DBGET
integrated database retrieval system
