Fibrobacter succinogenes: FSU_0812
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Entry
FSU_0812 CDS
T02105
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
Organism
fsc
Fibrobacter succinogenes
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Response_reg
AAA_5
DUF1492
HTH_23
AAA
HTH_50
Mg_chelatase
HTH_11
DUF134
AAA_16
HTH_24
nSTAND3
AAA_2
HTH_7
DUF1635
P-loop_TraG
Mga
HTH_22
HTH_17
BrxC_BrxD
HTH_Tnp_ISL3
Avian_gp85
Motif
Other DBs
NCBI-ProteinID:
ADL26033
UniProt:
C9RL62
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Position
902739..904295
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AA seq
518 aa
AA seq
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MMNILIADFDRKFVEELQRNWSIAGTNLLVCSDEKTLMPLIKKTSIDLAFIEVPFLMLDN
MDLISYLKERQPGVEIFVLCDDRNWQGAASAITRGASSFLKKPVTLSLLESTTSKIQAQQ
QNKSNTQLMESQVLDSLLGDTPEMRKILKTVYKVAPTNSTLLITGESGSGKEFLANVVHR
YSKRANEPFVPVNCGAIPENLVESELFGSKKGSYTGSTADKKGLFESANGGTLFLDEVGE
LSLATQVKLLRFLQSHEIRRVGETEARYLDIRIIAATNRDLQKSMHEGRFREDLYYRLNT
FHLQLPPLRDRKPVIPNLIRYFILKNKEAQGKEIHDLEPAALYALTKYPYPGNIRELENI
MEHAIVLSEGGVIKLEDLPEYVQVEAREKAVAIPHIKEAGGLKESASEPVFDNAEDAEEN
EKSVENPLGKPIHFEPISGKTDRAGLLTHNPTKFITHNPAPEEEEILSLDEMERRHILHA
LSICKNNKTEVCKKLGISRATLWRKLKELKIEMDGGEE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatatcctgatcgctgattttgatcggaaatttgtcgaggagctacagcgcaac
tggtccatcgccggaacgaacctcctggtctgctccgacgaaaagactctaatgccgcta
ataaaaaagacgtcgatagaccttgcgtttatcgaggttccttttttaatgctcgacaat
atggatttgatcagctatttgaaggaacgccagcctggtgtagaaatctttgtgctgtgc
gatgaccgcaactggcagggggccgctagcgccatcactcgtggtgcaagcagcttcttg
aagaagccggtcacgctatcgctccttgagagcacgacaagcaagatccaggctcagcaa
caaaataagtccaacacacagctcatggaatcccaagtgttggacagccttctcggcgac
acgcccgagatgcgcaaaatcctcaagacagtttataaggttgcaccgactaacagcact
ttgcttataaccggcgagtctggttcgggcaaggaatttttggcaaacgtcgtccaccgc
tacagcaagcgcgcgaacgaaccgtttgtgccggtcaactgcggcgccatccccgaaaac
ctcgtggaaagcgaactcttcggtagcaagaagggatcgtacacaggctctaccgccgac
aaaaagggcttgtttgaatccgccaatggcggtacgcttttcctcgacgaagtcggcgag
ctttcgcttgcaacgcaagtgaagcttttacgttttctgcaaagccacgagattcgtcgc
gtgggcgaaacggaagcccgctatttggacatccgcattatcgcagcaaccaaccgcgat
ctgcaaaaatccatgcacgaggggcgtttccgcgaagacctttactaccgcttgaatacg
ttccacttgcagctcccgccgctccgcgacaggaagcccgtcatcccgaacttgattcgt
tactttatcttaaagaacaaggaagcgcagggcaaggaaatccatgaccttgaacccgcc
gctctttatgctttgacaaagtacccctaccccggaaacatccgcgagctcgaaaacatc
atggagcatgcgattgtgctttcggaaggtggagtcatcaagctcgaagacttgccggaa
tatgtgcaggtggaagcccgtgaaaaggcggttgcgattccgcatatcaaggaagccggc
ggccttaaagaaagcgctagcgagcctgttttcgacaacgccgaagatgcggaagagaat
gaaaagtctgtcgagaatcctctcggaaagccgattcattttgaaccgatttcgggcaag
acggatagagcagggcttttgacgcacaacccgacgaagttcatcacgcataatcctgcg
cccgaagaagaagaaattctttcgctcgacgagatggaacgcaggcacattctgcatgcg
ctcagcatttgcaagaacaacaaaacggaagtctgcaaaaaactcggcattagccgcgct
acactttggcgcaagctcaaagagcttaaaattgaaatggacggcggagaggagtga
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